{"id":"W4393976282","doi":"10.1371/journal.ppat.1011900","title":"In vivo single-cell high-dimensional mass cytometry analysis to track the interactions between Klebsiella pneumoniae and myeloid cells","year":2024,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Directorate for Biological Sciences; Queen's University Belfast; Queen's University; Wellcome Trust","keywords":"Mass cytometry; Biology; Immune system; Microbiology; Klebsiella pneumoniae; Monocyte; Innate immune system; Flow cytometry; Cell biology; Immunology; Phenotype; Escherichia coli","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004738482,0.0003900733,0.0003352987,0.0007534752,0.0003715589,0.0006952921,0.0003241326,0.0007802058,0.002408116],"category_scores_gemma":[0.0002924864,0.0002564535,0.0002910924,0.0003303338,0.0002794626,0.0004013714,0.0003417517,0.0008897553,0.0007736706],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004113741,"about_ca_system_score_gemma":0.0002725327,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004651796,"about_ca_topic_score_gemma":0.001064396,"domain_scores_codex":[0.9997335,0.00003232355,0.00002090124,0.00008864498,0.00008208498,0.00004256901],"domain_scores_gemma":[0.9997252,0.0000632529,0.00006288888,0.0000391607,0.00006205243,0.00004736547],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004329622,0.0000281457,0.0007534497,0.00003719018,0.000006530302,0.00001804888,0.00002682947,0.0001685936,0.9957871,0.0002919452,0.0001307729,0.002708093],"study_design_scores_gemma":[0.00001761413,0.0002065708,0.0108337,0.00001304062,0.00002533795,0.0002542219,0.000066582,0.01595243,0.9670919,0.0007008392,0.004816226,0.00002148817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6516786,0.002648823,0.3326871,0.0007145862,0.0002612113,0.0004583032,0.004531506,0.001727064,0.005292728],"genre_scores_gemma":[0.7475564,0.00203248,0.2397384,0.0005349047,0.0001251549,0.0008670923,0.002434058,0.000195386,0.006516231],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002408116,"threshold_uncertainty_score":0.008055925,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01523202017299263,"score_gpt":0.2412394231589841,"score_spread":0.2260074029859915,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}