{"id":"W4394012293","doi":"10.1186/s12870-024-04935-7","title":"Comparative secretome analysis of Striga and Cuscuta species identifies candidate virulence factors for two evolutionarily independent parasitic plant lineages","year":2024,"lang":"en","type":"article","venue":"BMC Plant Biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Leverhulme Trust; UK Research and Innovation","keywords":"Biology; Striga; Parasitic plant; Striga hermonthica; Cuscuta; Botany; Scrophulariaceae; Virulence; Host (biology); Obligate parasite; Oryza; Gene; Oryza sativa; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001866201,0.0001858731,0.0005063357,0.00009386215,0.0001515022,0.00005891481,0.000193351,0.000114345,0.00007380405],"category_scores_gemma":[0.00003120867,0.00007294755,0.0001374248,0.0003732989,0.0002127893,0.00009116856,0.00004071211,0.00009365197,0.000004359354],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002132948,"about_ca_system_score_gemma":0.00002438586,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006704186,"about_ca_topic_score_gemma":0.01471988,"domain_scores_codex":[0.9987587,0.0001006907,0.0003140368,0.000422351,0.000119829,0.0002843351],"domain_scores_gemma":[0.9982485,0.001472389,0.0001112937,0.00005392804,0.00003825791,0.00007564858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002200361,0.00005666539,0.2667529,0.00009147162,0.0007914871,0.00001980093,0.000376645,0.00008743679,0.7254398,0.005196993,0.0008502076,0.0001165652],"study_design_scores_gemma":[0.0001635126,0.0002243111,0.9679151,0.00008402186,0.0004448736,0.00002805541,0.0008015132,0.003430441,0.02221409,0.000459594,0.003923985,0.0003105405],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.963975,0.002385319,0.0001853482,0.00005791994,0.0002241508,0.0002087938,0.03286049,0.00004363867,0.00005941049],"genre_scores_gemma":[0.9939444,0.0004002556,0.00004131443,0.00001456483,0.0000878116,0.0000172941,0.005205124,7.995399e-7,0.0002884016],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7032257,"threshold_uncertainty_score":0.8214041,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04143154922703746,"score_gpt":0.2835343371759662,"score_spread":0.2421027879489288,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}