{"id":"W4394093362","doi":"10.6084/m9.figshare.20167715","title":"Additional file 1 of Comparative genomics analysis and virulence-related factors in novel Aliarcobacter faecis and Aliarcobacter lanthieri species identified as potential opportunistic pathogens","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Microbial Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; University of Prince Edward Island; Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","funders":"","keywords":"Virulence; Biology; Comparative genomics; Microbiology; Genomics; Computational biology; Genetics; Genome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001392999,0.001440488,0.001658438,0.003169085,0.001004247,0.00205064,0.002348595,0.001803895,0.5004033],"category_scores_gemma":[0.01083756,0.0005904011,0.001147467,0.005581762,0.0004026535,0.00165688,0.001610779,0.001354107,0.09292367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001136526,"about_ca_system_score_gemma":0.002259169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008710866,"about_ca_topic_score_gemma":0.01631511,"domain_scores_codex":[0.9992779,0.0000898344,0.0001159006,0.0002736289,0.0001214713,0.0001212181],"domain_scores_gemma":[0.9941356,0.003773926,0.0005025233,0.0004382138,0.0007973493,0.0003523612],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003349879,0.00009712968,0.004109701,0.005919304,0.0001090594,0.00008716136,0.00007594733,0.0006180775,0.0004731775,0.0006449572,0.9828972,0.004633297],"study_design_scores_gemma":[0.003126078,0.0001795727,0.03046293,0.002937262,0.0002854571,0.0003584975,0.0004167731,0.001362451,0.001077567,0.004658055,0.9550133,0.000122069],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00007188913,0.00001142711,0.00002889438,0.00001672104,0.00000438965,0.000008968354,0.9996842,0.00006014633,0.0001134338],"genre_scores_gemma":[0.00117664,0.00004638555,0.0005945623,0.00008878121,0.000009017127,0.0002074962,0.9971334,0.0001087852,0.000634886],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.5004033,"threshold_uncertainty_score":0.7126139,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0264553924494372,"score_gpt":0.2499252746183633,"score_spread":0.2234698821689261,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}