{"id":"W4394095693","doi":"10.6084/m9.figshare.24130109","title":"Additional file 1 of Genomic classification and antimicrobial resistance profiling of Streptococcus pneumoniae and Haemophilus influenzae isolates associated with paediatric otitis media and upper respiratory infection","year":2023,"lang":"en","type":"dataset","venue":"Open MIND","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; McMaster University; University of Waterloo","funders":"","keywords":"Streptococcus pneumoniae; Haemophilus influenzae; Microbiology; Otitis; Medicine; Antimicrobial; Acute otitis media; Antibiotic resistance; Biology; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001506499,0.00144707,0.001328821,0.002155218,0.000956776,0.002064361,0.002108857,0.00209529,0.3552729],"category_scores_gemma":[0.0131283,0.0005725367,0.001148021,0.003634993,0.0003810181,0.001464924,0.001608678,0.001475489,0.1021612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001474468,"about_ca_system_score_gemma":0.002384931,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01560443,"about_ca_topic_score_gemma":0.02874925,"domain_scores_codex":[0.9988797,0.0001623474,0.0002049953,0.0004009687,0.0001771295,0.0001746975],"domain_scores_gemma":[0.9948613,0.002580268,0.000518361,0.0006535727,0.00102933,0.0003571917],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002199979,0.00006216468,0.004119838,0.001799062,0.00004836701,0.00005708584,0.00003705673,0.0003616665,0.000174535,0.0003272424,0.9893453,0.003447772],"study_design_scores_gemma":[0.001854827,0.0001614765,0.02612387,0.001950338,0.0001501354,0.0003482761,0.0003383775,0.001261238,0.000817302,0.002697623,0.9642087,0.00008785802],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0000807561,0.00001130579,0.00002913665,0.00002848423,0.000008141661,0.00001204235,0.9996558,0.00004538915,0.0001288],"genre_scores_gemma":[0.0006800977,0.00002791026,0.0003622324,0.00007250164,0.00001166618,0.0001614846,0.9980983,0.00004383082,0.0005419818],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.3552729,"threshold_uncertainty_score":0.9196249,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03065241602173331,"score_gpt":0.2779313154934449,"score_spread":0.2472788994717116,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}