{"id":"W4394260605","doi":"10.6084/m9.figshare.20267227","title":"Additional file 2 of Toward a base-resolution panorama of the in vivo impact of cytosine methylation on transcription factor binding","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill Genome Centre","funders":"","keywords":"Panorama; Methylation; Cytosine; In vivo; Transcription factor; DNA methylation; Biology; Genetics; Computer science; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001538592,0.002064546,0.001975828,0.002310832,0.001105972,0.002568264,0.002907571,0.001960305,0.5026823],"category_scores_gemma":[0.01003812,0.000889448,0.001428198,0.003897623,0.0004313148,0.001505934,0.001498041,0.001797522,0.1507202],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001206887,"about_ca_system_score_gemma":0.00228229,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01090878,"about_ca_topic_score_gemma":0.02352586,"domain_scores_codex":[0.999127,0.000119839,0.00009502563,0.0003471663,0.000169971,0.0001410221],"domain_scores_gemma":[0.9945193,0.003551152,0.000332661,0.0006057122,0.0006980137,0.0002931535],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001930118,0.00005412739,0.002309398,0.002503492,0.00009127159,0.00004834503,0.00003508877,0.0006109368,0.0003795072,0.0005165461,0.990418,0.002840332],"study_design_scores_gemma":[0.002519718,0.0001267829,0.01739761,0.001168012,0.0002470509,0.0002755628,0.0001558105,0.001417377,0.001816654,0.006063591,0.9687052,0.0001065678],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00004832621,0.00001401168,0.00005495119,0.00001670472,0.000005518597,0.000007758341,0.9995717,0.0001292695,0.000151674],"genre_scores_gemma":[0.0007956459,0.00003605428,0.0005137649,0.00008530333,0.000008337294,0.0001722018,0.9974236,0.0002062352,0.0007588429],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.5026823,"threshold_uncertainty_score":0.7093633,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03623324803811149,"score_gpt":0.2786492477308657,"score_spread":0.2424159996927543,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}