{"id":"W4394315542","doi":"10.6084/m9.figshare.22619759","title":"Additional file 1 of A phylogenomic analysis of Limosilactobacillus reuteri reveals ancient and stable evolutionary relationships with rodents and birds and zoonotic transmission to humans","year":2023,"lang":"en","type":"dataset","venue":"Open MIND","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Transmission (telecommunications); Evolutionary biology; Biology; Phylogenomics; Zoology; Phylogenetics; Geography; Computer science; Genetics; Clade","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001382757,0.001543591,0.001535476,0.003094258,0.001214197,0.002053453,0.002605204,0.002040182,0.457661],"category_scores_gemma":[0.01189143,0.0007113839,0.001514356,0.005365041,0.0004944076,0.001554178,0.001757283,0.001765496,0.07677301],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001468283,"about_ca_system_score_gemma":0.002721049,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02018792,"about_ca_topic_score_gemma":0.03375791,"domain_scores_codex":[0.9991855,0.0001064481,0.0001282019,0.000285492,0.000125501,0.0001688739],"domain_scores_gemma":[0.9941392,0.003675019,0.0005262138,0.0004799165,0.0008013039,0.0003784518],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002334144,0.00006873091,0.004128124,0.004078173,0.0001104093,0.00007495858,0.00007518439,0.0004558323,0.0003582238,0.0007735886,0.9868544,0.002788981],"study_design_scores_gemma":[0.00408886,0.0001615339,0.03684784,0.003464705,0.0003952755,0.0005090067,0.0004409905,0.001323257,0.001091927,0.005685397,0.9458537,0.0001374882],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00005753228,0.00001231479,0.00002514099,0.00002247794,0.000005559433,0.000008153123,0.9997171,0.00003912648,0.0001126236],"genre_scores_gemma":[0.0009940157,0.00005317207,0.0004733107,0.0001073737,0.00001220287,0.0001962561,0.997454,0.00007888462,0.0006307054],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.457661,"threshold_uncertainty_score":0.7735807,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04859942007677234,"score_gpt":0.3064690615669437,"score_spread":0.2578696414901713,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}