{"id":"W4394373264","doi":"10.6084/m9.figshare.22619762","title":"Additional file 2 of A phylogenomic analysis of Limosilactobacillus reuteri reveals ancient and stable evolutionary relationships with rodents and birds and zoonotic transmission to humans","year":2023,"lang":"en","type":"dataset","venue":"Figshare","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Transmission (telecommunications); Evolutionary biology; Biology; Phylogenomics; Zoology; Phylogenetics; Geography; Computer science; Genetics; Clade","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001440121,0.001472514,0.001560454,0.003080942,0.001197263,0.002239001,0.002605543,0.002158695,0.4912863],"category_scores_gemma":[0.01391212,0.0007449794,0.001381057,0.00479037,0.0004424783,0.001650577,0.001692331,0.001688082,0.0981243],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001296928,"about_ca_system_score_gemma":0.002323736,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01588056,"about_ca_topic_score_gemma":0.02842067,"domain_scores_codex":[0.9991909,0.0001106839,0.0001343288,0.0002788235,0.0001299985,0.0001552834],"domain_scores_gemma":[0.9934029,0.004305541,0.0005276838,0.0005374334,0.0008725249,0.0003538776],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000200064,0.00005415322,0.003967326,0.003646278,0.00008543523,0.00005829489,0.00007136828,0.0004345743,0.0002243213,0.0006072883,0.9875998,0.003051093],"study_design_scores_gemma":[0.003193495,0.000117552,0.03150605,0.003102926,0.0003026545,0.0003170132,0.0003476022,0.001255427,0.0006939727,0.00450852,0.9545463,0.0001085443],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00005248541,0.00001073907,0.00002430613,0.00002296139,0.000005130879,0.000007539028,0.999723,0.00004551891,0.0001083096],"genre_scores_gemma":[0.001078094,0.00004368712,0.0004999391,0.00009316303,0.00001114774,0.0002043682,0.9973085,0.00009785485,0.0006632712],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.4912863,"threshold_uncertainty_score":0.7256183,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04206628808503551,"score_gpt":0.2748038282431344,"score_spread":0.2327375401580989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}