{"id":"W4394411655","doi":"10.6084/m9.figshare.22602593","title":"Additional file 12 of Comparative genomic analysis of Citrobacter sp. XT1-2-2 reveals insights into the molecular mechanism of microbial immobilization of heavy metals","year":2023,"lang":"en","type":"dataset","venue":"Figshare","topic":"Chromium effects and bioremediation","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Mechanism (biology); Citrobacter; Heavy metals; Computational biology; Chemistry; Biology; Environmental chemistry; Genetics; Gene; Enterobacteriaceae; Epistemology; Escherichia coli; Philosophy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008547586,0.0001912762,0.0006349636,0.0001987576,0.00003384335,0.000008369234,0.0003715197,0.0001671661,0.7270505],"category_scores_gemma":[0.0003009568,0.000141951,0.0003103677,0.0007504386,0.00006584077,0.00007804341,0.000270361,0.0001014232,0.0003899185],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009215642,"about_ca_system_score_gemma":0.00004410623,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003828788,"about_ca_topic_score_gemma":0.0008922332,"domain_scores_codex":[0.9984531,0.0001677855,0.0005706127,0.0002851512,0.0004119647,0.0001114034],"domain_scores_gemma":[0.9977763,0.0006233465,0.001112273,0.0003859425,0.00007010142,0.00003207256],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001284366,0.00006160231,6.303325e-7,0.000183032,0.0003793704,9.156597e-7,0.0001302965,0.000710066,0.06302863,0.000001301788,0.9354807,0.00001058724],"study_design_scores_gemma":[0.0007360894,0.0005860078,0.02366993,0.003480744,0.003011847,0.00000214207,0.0001741413,0.002626206,0.3041507,0.0002511053,0.6603754,0.0009357646],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.003978847,0.00003116996,0.000002462484,0.000002945946,0.00002477102,0.0004303536,0.9955063,0.00000410922,0.00001902335],"genre_scores_gemma":[0.00968172,0.000008852488,0.00006649938,0.00002044227,0.00002521307,0.0001362253,0.9900323,0.000009604972,0.00001916578],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.7266605,"threshold_uncertainty_score":0.5788594,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01808300903809251,"score_gpt":0.2380727496566014,"score_spread":0.2199897406185089,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}