{"id":"W4394509814","doi":"10.6084/m9.figshare.20488410","title":"Additional file 2 of Does swab type matter? Comparing methods for Mannheimia haemolytica recovery and upper respiratory microbiome characterization in feedlot cattle","year":2022,"lang":"en","type":"dataset","venue":"Open MIND","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Feedlot; Microbiome; Biology; Microbiology; Animal science; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002497974,0.001447726,0.001797329,0.002164815,0.000899908,0.001977284,0.001962393,0.002023364,0.511077],"category_scores_gemma":[0.02585691,0.0006152997,0.00187336,0.002984449,0.000382421,0.001373905,0.001271806,0.001236047,0.06369057],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001272123,"about_ca_system_score_gemma":0.002339686,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01293505,"about_ca_topic_score_gemma":0.02422435,"domain_scores_codex":[0.9987798,0.0002402599,0.0002000086,0.0003939506,0.0002099627,0.0001760583],"domain_scores_gemma":[0.9830351,0.01243323,0.001355955,0.0009223242,0.001829767,0.000423624],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008635771,0.0001440533,0.006698954,0.01111555,0.000365342,0.00005136418,0.00008756427,0.000593895,0.0002891842,0.0005676424,0.9731866,0.00603621],"study_design_scores_gemma":[0.009873792,0.0003939566,0.06812612,0.00888476,0.001170552,0.0003730796,0.0004364597,0.001748451,0.0009585987,0.006091437,0.9017522,0.0001905708],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0001229788,0.00003020271,0.00004911012,0.00003660367,0.000008356332,0.00001867024,0.999543,0.00006070233,0.0001304113],"genre_scores_gemma":[0.003644923,0.0001060795,0.001215868,0.0002796226,0.00003534533,0.001102493,0.9909006,0.000248503,0.002466586],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.511077,"threshold_uncertainty_score":0.6973894,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04994687395872278,"score_gpt":0.3642400855358187,"score_spread":0.3142932115770959,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}