{"id":"W4394538166","doi":"10.6084/m9.figshare.24130109.v1","title":"Additional file 1 of Genomic classification and antimicrobial resistance profiling of Streptococcus pneumoniae and Haemophilus influenza isolates associated with paediatric otitis media and upper respiratory infection","year":2023,"lang":"en","type":"dataset","venue":"Open MIND","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; McMaster University; University of Waterloo","funders":"","keywords":"Streptococcus pneumoniae; Haemophilus influenzae; Microbiology; Haemophilus; Otitis; Acute otitis media; Antibiotic resistance; Antimicrobial; Medicine; Biology; Virology; Bacteria; Antibiotics; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001468634,0.001442702,0.001333129,0.002156067,0.0009184246,0.002040725,0.002115832,0.002104307,0.3450761],"category_scores_gemma":[0.01310097,0.0005748034,0.001148709,0.003688517,0.0003797001,0.00146688,0.001581468,0.001484785,0.09938476],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001496635,"about_ca_system_score_gemma":0.002359202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01560677,"about_ca_topic_score_gemma":0.02842166,"domain_scores_codex":[0.9989012,0.0001603369,0.0002010667,0.0003932508,0.0001747357,0.000169365],"domain_scores_gemma":[0.9949007,0.002630729,0.0005040995,0.0006427841,0.0009752857,0.0003464275],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002130349,0.00005971375,0.003920472,0.001775326,0.00004800826,0.00005594757,0.00003562435,0.0003682338,0.0001593889,0.000323882,0.9896213,0.003419053],"study_design_scores_gemma":[0.001863883,0.0001552282,0.02494522,0.001879731,0.0001478993,0.0003549198,0.0003236476,0.001264264,0.0007729041,0.00267614,0.9655312,0.00008498318],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00007667522,0.00001160354,0.00002745485,0.00002886417,0.000007643812,0.00001140042,0.9996626,0.00004463414,0.000129133],"genre_scores_gemma":[0.0006792737,0.00002839256,0.0003426712,0.00007000983,0.00001104012,0.0001517373,0.9981609,0.00004149295,0.0005144661],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.3450761,"threshold_uncertainty_score":0.9341694,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03596877758077996,"score_gpt":0.2864140537598781,"score_spread":0.2504452761790981,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}