{"id":"W4394580130","doi":"10.1038/s41590-024-01778-0","title":"Large-scale phenotyping of patients with long COVID post-hospitalization reveals mechanistic subtypes of disease","year":2024,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre; St. Thomas Hospital","funders":"European and Developing Countries Clinical Trials Partnership; NIHR Leicester Biomedical Research Centre; NIHR Imperial Biomedical Research Centre; Manchester Biomedical Research Centre; National Institute for Health Research Health Protection Research Unit; University of Warwick; University of Oxford; Blood Cancer UK; Grifols; Versus Arthritis; Public Health England; Rosetrees Trust; Imperial College London; Wellcome Trust; Asthma and Lung UK; Diabetes UK; Cystic Fibrosis Trust; Kidney Research UK; Medical Research Council; Department of Health and Social Care; Insmed; National Institute for Health and Care Research; Department for International Development; AstraZeneca; UK Research and Innovation; Strong; British Heart Foundation; British HIV Association; Gilead Sciences","keywords":"Coronavirus disease 2019 (COVID-19); Disease; Coronavirus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); 2019-20 coronavirus outbreak; Medicine; Phenotype; Pandemic; Immunology; Virology; Biology; Infectious disease (medical specialty); Outbreak; Pathology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003577012,0.0002895269,0.0004114243,0.0003916733,0.00038642,0.0004890749,0.0002240869,0.0003345678,0.0009873967],"category_scores_gemma":[0.0009817333,0.0001180729,0.0003456881,0.0005064655,0.0001910305,0.0003540102,0.0005606611,0.0004332823,0.000207489],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002094223,"about_ca_system_score_gemma":0.0001947704,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002116712,"about_ca_topic_score_gemma":0.004107861,"domain_scores_codex":[0.9997142,0.0000560127,0.00003152719,0.00008592288,0.00003858868,0.00007365287],"domain_scores_gemma":[0.9993225,0.00008427288,0.0003103047,0.00004851399,0.0000773459,0.0001570345],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002957934,0.00002159956,0.9937146,0.00001860871,0.00004291868,0.0001886059,0.0001025337,0.00003054969,0.002467202,0.00001174916,0.0001430759,0.002962579],"study_design_scores_gemma":[0.00000288781,0.0001148949,0.998948,0.000006537214,0.00001299484,0.0003100136,0.0002126004,0.00006430143,0.0001490402,0.00001652147,0.0001594487,0.000002745117],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986241,0.0003821172,0.0001823262,0.00004830462,0.0000107096,0.00001201402,0.0004187337,0.000006048287,0.0003157337],"genre_scores_gemma":[0.9987967,0.0001144608,0.0001716258,0.00004310696,0.00001328834,0.00001170047,0.0007152182,0.000002653516,0.0001311847],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002116712,"threshold_uncertainty_score":0.004208863,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002657641334653551,"score_gpt":0.2530825489755075,"score_spread":0.250424907640854,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}