{"id":"W4394580522","doi":"10.3897/phytokeys.241.118903","title":"Description of Navicula vanseea sp. nov. (Naviculales, Naviculaceae), a new species of diatom from the highly alkaline Lake Van (Republic of Türkiye) with complete characterisation of its organellar genomes and multigene phylogeny","year":2024,"lang":"en","type":"article","venue":"PhytoKeys","topic":"Diatoms and Algae Research","field":"Materials Science","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Generalitat de Catalunya; Natural Sciences and Engineering Research Council of Canada; Centres de Recerca de Catalunya; Rural and Environment Science and Analytical Services Division","keywords":"Navicula; Diatom; Genome; Biology; Botany; Taxonomy (biology); Phylogenetics; Zoology; Evolutionary biology; Geography; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007913177,0.0004684919,0.0003318448,0.0009065899,0.0005749051,0.0006620595,0.0003810145,0.0004418925,0.001904995],"category_scores_gemma":[0.0003079785,0.0001270585,0.0002493043,0.0008348194,0.0002799231,0.0007169996,0.0005892161,0.00052552,0.0008324427],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004323363,"about_ca_system_score_gemma":0.0007057841,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004648579,"about_ca_topic_score_gemma":0.008946897,"domain_scores_codex":[0.9998765,0.000006564115,0.00002059461,0.0000517825,0.00002714577,0.00001737829],"domain_scores_gemma":[0.9997626,0.00003225379,0.00006420344,0.00004157975,0.00005829388,0.00004103181],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004920463,0.0001340241,0.08737379,0.001411726,0.0001644776,0.00602387,0.001629355,0.00124465,0.6208827,0.001240326,0.00412729,0.2752758],"study_design_scores_gemma":[0.00004168567,0.0005449427,0.5701453,0.0005838493,0.0002614596,0.03035113,0.003277364,0.001049506,0.02582077,0.0007134149,0.3671322,0.00007843639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9389527,0.0153337,0.007610569,0.0009837558,0.0008263286,0.0002210824,0.0101491,0.0002834967,0.02563939],"genre_scores_gemma":[0.943115,0.005557886,0.02066398,0.0004435758,0.0001272766,0.0001471157,0.02207351,0.00006776928,0.007803872],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004648579,"threshold_uncertainty_score":0.009243011,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03249188552580418,"score_gpt":0.2475825051995777,"score_spread":0.2150906196737735,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}