{"id":"W4394674598","doi":"10.1038/s41467-024-47183-x","title":"Salmonella exploits membrane reservoirs for invasion of host cells","year":2024,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; University Health Network; Princess Margaret Cancer Centre; Hospital for Sick Children; University of Toronto","funders":"Office of Extramural Research, National Institutes of Health; National Institute of Diabetes and Digestive and Kidney Diseases; Natural Sciences and Engineering Research Council of Canada; U.S. Department of Health and Human Services; National Institutes of Health; Government of Canada; Ontario Innovation Trust; Canadian Institutes of Health Research; Leona M. and Harry B. Helmsley Charitable Trust","keywords":"Exocyst; Cell biology; Effector; Secretion; Biology; Vacuole; Cell membrane; Cell; Exocytosis; Cytoplasm; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001361143,0.00007765315,0.0000908348,0.00004273182,0.0001518974,0.00003456039,0.000641706,0.0001342312,0.0003962681],"category_scores_gemma":[0.0000399416,0.00007042282,0.00008951096,0.0002607723,0.0001234372,0.0001947654,0.000375301,0.0003767726,0.0001603097],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005997517,"about_ca_system_score_gemma":0.00001197245,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001172307,"about_ca_topic_score_gemma":0.0007734956,"domain_scores_codex":[0.999449,0.00003842965,0.0001739088,0.0001540983,0.00007362383,0.0001109022],"domain_scores_gemma":[0.9987528,0.0002919949,0.00004243468,0.0008527517,0.00002092341,0.00003910032],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00000661512,0.00006509326,0.00003359522,0.00002052103,0.00001195336,2.867896e-7,0.0002719689,0.00001987463,0.9742953,0.00082308,0.0233636,0.001088099],"study_design_scores_gemma":[0.00009541451,0.0000349444,0.002845947,0.00008407889,0.00002990931,0.000005332803,0.0001204163,0.0006054543,0.2578585,0.0001271195,0.7380836,0.0001092476],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8897609,0.01141237,0.001142031,0.02466938,0.002596977,0.002034818,0.0008244416,0.000378473,0.0671806],"genre_scores_gemma":[0.9892829,0.0009534551,0.007748011,0.0001423792,0.00002333228,0.00004327451,0.00006507319,0.00001646099,0.001725109],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7164368,"threshold_uncertainty_score":0.4338858,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02508678308704235,"score_gpt":0.2972308134988348,"score_spread":0.2721440304117925,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}