{"id":"W4394772609","doi":"10.5376/bm.2024.15.0001","title":"Rapid Detection of Rice Fragrance Allele <i>badh2-E7</i> by Recombinant Polymerase Amplification (RPA)","year":2024,"lang":"en","type":"article","venue":"Bioscience Methods","topic":"GABA and Rice Research","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Genotyping; Molecular biology; Biology; Variants of PCR; Polymerase chain reaction; Allele; Gene; Betaine; Marker-assisted selection; Recombinant DNA; Genetics; Genetic marker; Genotype; Biochemistry","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002822042,0.0001885731,0.0002361139,0.00006985275,0.0003965498,0.0001561531,0.0005792809,0.0001541057,0.0001860172],"category_scores_gemma":[0.0003460243,0.00007636347,0.0001529141,0.002201091,0.0003171337,0.0002987845,0.0001005061,0.0001847143,0.00004897481],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005917533,"about_ca_system_score_gemma":0.00003981098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001833337,"about_ca_topic_score_gemma":0.00004635549,"domain_scores_codex":[0.9972802,0.0006080279,0.000370117,0.0006898628,0.0005406722,0.0005111674],"domain_scores_gemma":[0.99874,0.0006696353,0.000118641,0.0001577551,0.000121667,0.000192323],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000008073695,0.00005743476,0.000009721138,0.00001847281,0.000003649519,9.298493e-7,0.0000401375,2.950893e-7,0.6130871,0.000238645,0.0004869997,0.3860485],"study_design_scores_gemma":[0.00007894347,0.0004471905,0.03485325,0.00003889018,0.00001362208,0.00001280328,0.0000940129,0.001949892,0.7722939,0.0005590737,0.189401,0.000257408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9683762,0.01463979,0.011162,0.002557535,0.001269804,0.0004459946,0.00005525458,0.0002002468,0.001293225],"genre_scores_gemma":[0.9909798,0.001768531,0.005357315,0.00006500672,0.000136184,0.00004251653,0.00002016065,0.000002712512,0.001627758],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3857911,"threshold_uncertainty_score":0.3114012,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03971876893535306,"score_gpt":0.3275744446243022,"score_spread":0.2878556756889491,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}