{"id":"W4394806441","doi":"10.3390/v16040605","title":"Host Immune Response Modulation in Avian Coronavirus Infection: Tracheal Transcriptome Profiling In Vitro and In Vivo","year":2024,"lang":"en","type":"article","venue":"Viruses","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique; Fonds de Recherche du Québec - Santé; Université de Montréal; University of Calgary","funders":"Université de Montréal; Egg Farmers of Canada; Institut national de la recherche scientifique; Natural Sciences and Engineering Research Council of Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Canadian Poultry Research Council; McGill University","keywords":"Transcriptome; In vivo; Immune system; Biology; In vitro; Coronavirus; Virology; Immune modulation; Microbiology; Immunology; Coronavirus disease 2019 (COVID-19); Gene expression; Gene; Medicine; Genetics; Pathology; Infectious disease (medical specialty)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001183568,0.0001631413,0.0002018444,0.0001706385,0.000167181,0.0002946853,0.00007093595,0.0002553446,0.0004864021],"category_scores_gemma":[0.00006873567,0.0001297878,0.0002179555,0.0001297155,0.0001615578,0.0001640767,0.0001383701,0.0003100797,0.0001994336],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001855766,"about_ca_system_score_gemma":0.0001219762,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008699951,"about_ca_topic_score_gemma":0.002007392,"domain_scores_codex":[0.9998963,0.00001550489,0.000005886441,0.00003682997,0.00001970411,0.00002591129],"domain_scores_gemma":[0.9999566,0.000008041464,0.00001381955,0.000003396887,0.000009071948,0.000009054489],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005763842,0.000007240134,0.001184539,0.00002986873,0.000003684831,0.00001181264,0.00002971301,0.00003948034,0.9981477,0.00000977825,0.00001756269,0.0004610467],"study_design_scores_gemma":[0.00001222842,0.000793722,0.3951515,0.00004710585,0.00009355635,0.0004109561,0.0008366068,0.003203693,0.595207,0.0001105079,0.004110143,0.00002295583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953928,0.001243186,0.001389968,0.00004015495,0.00001390511,0.00002172656,0.001064037,0.00001793468,0.0008163215],"genre_scores_gemma":[0.9924907,0.001062266,0.002262401,0.0001071832,0.00000934034,0.00006271755,0.002186616,0.00001497148,0.001803866],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008699951,"threshold_uncertainty_score":0.001729846,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05265287450853166,"score_gpt":0.2924755789164014,"score_spread":0.2398227044078697,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}