{"id":"W4394917830","doi":"10.1128/mra.01122-23","title":"Complete genome of <i>Acinetobacter calcoaceticus</i> AC001_UM from Red River soil banks in Winnipeg, Manitoba, Canada","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Acinetobacter calcoaceticus; Acinetobacter; Geography; Biology; Ecology; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001274416,0.0002634168,0.0003340816,0.00006591204,0.00005909825,0.0000157655,0.0003183573,0.0001764687,0.00003564161],"category_scores_gemma":[0.00001183278,0.0002485188,0.00008355001,0.0001181408,0.0001935625,0.000001246267,0.0002863977,0.0001463672,0.00001191986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008173589,"about_ca_system_score_gemma":0.0001764302,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.07160636,"about_ca_topic_score_gemma":0.2321095,"domain_scores_codex":[0.9984252,0.00009266871,0.0004161912,0.0005699044,0.00007285178,0.0004231605],"domain_scores_gemma":[0.9993963,0.00002556666,0.00008412818,0.0003768819,0.00006191803,0.00005518316],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007913118,0.00003619724,0.01618042,0.00002480871,0.0002566198,0.00002254361,0.0001666986,0.0001168392,0.972753,0.000002942297,0.01002453,0.0003362747],"study_design_scores_gemma":[0.0006460354,0.0001579446,0.01048962,0.00004111909,0.00003887725,0.00001373286,0.0001757747,0.0000161643,0.01883329,0.00002070147,0.9692813,0.0002854007],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9865437,0.005996302,0.00002224607,0.0003011721,0.000305597,0.0002185078,0.005828254,0.000004688297,0.0007795508],"genre_scores_gemma":[0.9929684,0.0002410321,0.0001357914,0.0008379809,0.0002121199,0.00002102099,0.004789584,0.00003109445,0.0007630237],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9592568,"threshold_uncertainty_score":0.9999967,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01085576482292279,"score_gpt":0.1969325008775483,"score_spread":0.1860767360546255,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}