{"id":"W4394920586","doi":"10.1111/dgd.12924","title":"Assembly of continuous high‐resolution draft genome sequence of <scp><i>Hemicentrotus pulcherrimus</i></scp> using long‐read sequencing","year":2024,"lang":"en","type":"article","venue":"Development Growth & Differentiation","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science","keywords":"Hemicentrotus; Contig; Genome; Biology; Tandem repeat; Gene; Sequence assembly; Genetics; Locus (genetics); DNA sequencing; Genome size; Computational biology; Whole genome sequencing; Transcriptome; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007580203,0.001207616,0.001299912,0.001763382,0.001070134,0.001234537,0.0008103066,0.0007487361,0.003581072],"category_scores_gemma":[0.001845779,0.0007686851,0.001814568,0.003027776,0.0003008678,0.0006990553,0.0007749024,0.001488101,0.002476384],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008085924,"about_ca_system_score_gemma":0.00209788,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009521753,"about_ca_topic_score_gemma":0.009420578,"domain_scores_codex":[0.9994786,0.00006345769,0.00005896186,0.0002023671,0.0001332603,0.00006341486],"domain_scores_gemma":[0.9991254,0.0001372733,0.0001289718,0.00009764898,0.0003931938,0.0001175496],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001679715,0.0001258407,0.01335966,0.003986476,0.0005240421,0.002315016,0.001507796,0.006224938,0.8485106,0.001903298,0.02808255,0.09178001],"study_design_scores_gemma":[0.000823205,0.001050746,0.2454772,0.001147965,0.002281108,0.003569592,0.001396753,0.05018457,0.3035234,0.003905751,0.3859566,0.0006832375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5212224,0.005553305,0.2145969,0.00103972,0.0009992395,0.001546192,0.2343664,0.008964034,0.01171187],"genre_scores_gemma":[0.1984684,0.002563308,0.2113579,0.0003703872,0.0001769889,0.001465298,0.5759332,0.002393433,0.007271089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009521753,"threshold_uncertainty_score":0.01893264,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01897650797851863,"score_gpt":0.2352418299454693,"score_spread":0.2162653219669507,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}