{"id":"W4394932090","doi":"10.20944/preprints202404.1033.v1","title":"Molecular Analysis of Metabolites Synthesized by<em> Candida albicans</em> and<em> Staphylococcus aureus</em> in In Vitro Cultures and Bronchoalveolar Lavage Specimens Reflecting Single or Duo-factor Pneumonia","year":2024,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Waterloo; Uniwersytet Mikolaja Kopernika w Toruniu; Narodowym Centrum Nauki","keywords":"Staphylococcus aureus; Candida albicans; Microbiology; In vitro; Bronchoalveolar lavage; Chemistry; Biology; Medicine; Bacteria; Biochemistry; Genetics; Lung","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.001760609,0.001377844,0.002647009,0.0006117105,0.0002938891,0.000464487,0.001340344,0.0011162,0.0006832103],"category_scores_gemma":[0.0009049866,0.0007699963,0.0008208668,0.002203226,0.000319301,0.000229466,0.003076621,0.001709099,0.00003133863],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004123804,"about_ca_system_score_gemma":0.0001288421,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009656961,"about_ca_topic_score_gemma":0.01203339,"domain_scores_codex":[0.9916704,0.0008402519,0.001968755,0.002994607,0.001111502,0.001414518],"domain_scores_gemma":[0.9966765,0.0006032242,0.0009872068,0.000879631,0.0003067096,0.0005467068],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004642146,0.000621698,0.01820272,0.0002699154,0.00170636,0.000123496,0.002623682,0.0001701932,0.9721433,0.0001245398,0.00003055584,0.00351932],"study_design_scores_gemma":[0.001185693,0.0003330608,0.3658777,0.0007786672,0.002028245,0.00001313164,0.001250307,0.001087176,0.6179906,0.001444233,0.005779098,0.002232159],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9865319,0.008538311,0.000007535818,0.0004868027,0.0002839674,0.00152338,0.001552663,0.0002024872,0.0008729326],"genre_scores_gemma":[0.9961185,0.001992506,0.0003653574,0.0001585893,0.0001763277,0.00017389,0.0004309067,0.00003710324,0.0005468122],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3541527,"threshold_uncertainty_score":0.9998972,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04047853884580976,"score_gpt":0.2909311855462555,"score_spread":0.2504526467004458,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}