{"id":"W4394933497","doi":"10.1126/science.adj3166","title":"Phage predation, disease severity, and pathogen genetic diversity in cholera patients","year":2024,"lang":"en","type":"article","venue":"Science","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; McGill University; McGill Genome Centre","funders":"","keywords":"Pathogen; Cholera; Genetic diversity; Biology; Predation; Diversity (politics); Disease; Virology; Genetics; Ecology; Medicine; Environmental health; Political science; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000247338,0.0001698384,0.0002690135,0.0004329739,0.0005129451,0.000535525,0.0001456188,0.0003822303,0.001262497],"category_scores_gemma":[0.001011249,0.0001945679,0.0002165531,0.0004639438,0.0003741329,0.0003467172,0.0004939349,0.0004185736,0.0001803164],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000433391,"about_ca_system_score_gemma":0.0002818368,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005280667,"about_ca_topic_score_gemma":0.006462247,"domain_scores_codex":[0.9997224,0.00006436263,0.00003296136,0.00006706245,0.000041086,0.00007202926],"domain_scores_gemma":[0.9995322,0.00007323397,0.0001576817,0.00002757725,0.00005669497,0.0001525774],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00009901227,0.00002052358,0.9980409,0.000007092718,0.00001283676,0.00008996679,0.0001732135,0.00001596407,0.000992295,0.00001105575,0.00003706606,0.0005001063],"study_design_scores_gemma":[0.000002805761,0.0001428586,0.9981961,0.000005732115,0.000009561196,0.0003217251,0.0009448215,0.00007714923,0.0001374472,0.00002376868,0.0001328543,0.000005277445],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996,0.00006165019,0.0000268906,0.00002299785,0.000001456509,0.000002552682,0.00008580286,9.008516e-7,0.0001977523],"genre_scores_gemma":[0.9997707,0.00003424972,0.000028027,0.00001561459,0.00000152444,0.000002095776,0.00005886367,6.607039e-7,0.00008824407],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005280667,"threshold_uncertainty_score":0.01049989,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01071465646218116,"score_gpt":0.2695512319559707,"score_spread":0.2588365754937895,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}