{"id":"W4395017935","doi":"10.2139/ssrn.4799123","title":"Temporal and Geographic Strain Dynamics of Invasive Streptococcus Pyogenes In Australia: A Multi-Centre Clinical and Genomic Epidemiology Study 2011-2023","year":2024,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Epidemiology; Streptococcus pyogenes; Strain (injury); Molecular epidemiology; Biology; Microbiology; Geography; Medicine; Genetics; Genotype; Internal medicine; Gene; Bacteria; Staphylococcus aureus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006706975,0.000280482,0.0004337564,0.001057416,0.0007033783,0.0009030621,0.0005697433,0.0007783938,0.001098248],"category_scores_gemma":[0.002582353,0.0006008751,0.0004886574,0.002142094,0.000419234,0.0007351793,0.002050965,0.0007391681,0.0002614791],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00131569,"about_ca_system_score_gemma":0.001358527,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1400167,"about_ca_topic_score_gemma":0.1424959,"domain_scores_codex":[0.9992396,0.0001841547,0.00008221149,0.0001942363,0.000118871,0.0001809656],"domain_scores_gemma":[0.9983593,0.0001531113,0.0006337262,0.0001154266,0.0004132751,0.000325136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007113785,0.00004559466,0.9968331,0.00001795707,0.0000553786,0.0001205596,0.001032935,0.00005285912,0.0003844888,0.00002892281,0.0001641366,0.001192947],"study_design_scores_gemma":[9.614266e-7,0.00002198411,0.9993893,0.000004133966,0.00000711941,0.00005641881,0.0003882594,0.00004664678,0.00001105281,0.000005269311,0.00006681465,0.000001943686],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990318,0.0001150077,0.00008774382,0.00005636358,0.000002464535,0.00001303042,0.0004780664,0.000001871218,0.0002136002],"genre_scores_gemma":[0.9986093,0.0001666109,0.0001774606,0.00004738286,0.000006029411,0.00002366807,0.0004986384,0.00000323791,0.0004676278],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1400167,"threshold_uncertainty_score":0.2784035,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07107384541703068,"score_gpt":0.3918364711560177,"score_spread":0.3207626257389871,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}