{"id":"W4395452687","doi":"10.46471/gigabyte.119","title":"Genome assembly of the milky mangrove Excoecaria agallocha","year":2024,"lang":"en","type":"article","venue":"Gigabyte","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health PEI","funders":"Chinese University of Hong Kong","keywords":"Mangrove; Biology; Genome; Genome size; Evolutionary biology; Computational biology; Genetics; Ecology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001019964,0.0001111446,0.0001041671,0.0000193019,0.00005103936,0.00001865287,0.0002299995,0.00007341238,0.00001165624],"category_scores_gemma":[0.00001622372,0.00007906859,0.000143352,0.00007796664,0.00007243459,4.088331e-7,0.0002143996,0.0000576958,0.00001520421],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007032399,"about_ca_system_score_gemma":0.00005323255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001656419,"about_ca_topic_score_gemma":0.00002228687,"domain_scores_codex":[0.9993481,0.00002303307,0.0001455238,0.0002321104,0.00009023365,0.0001609809],"domain_scores_gemma":[0.9995478,0.000009128263,0.00003309848,0.0003427576,0.0000383075,0.00002885018],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00000734161,0.000009591807,0.0002892735,0.00002792216,0.0001167787,0.000001451041,0.0001147758,0.00003331667,0.9971049,0.0004365342,0.001058043,0.0008000332],"study_design_scores_gemma":[0.0002240526,0.0001549464,0.06211307,0.00003093117,0.00007320254,0.00001655826,0.00009550595,0.00005983481,0.5938789,0.0006004393,0.3425054,0.000247138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9813189,0.01206349,0.0001407852,0.00035961,0.0006548879,0.000129071,0.00004325219,0.000004893931,0.005285122],"genre_scores_gemma":[0.996717,0.000406386,0.0001604181,0.0001427155,0.0002756467,0.00001184456,0.000008922843,0.00002008255,0.002257005],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.403226,"threshold_uncertainty_score":0.3224323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00914056587104999,"score_gpt":0.2266113307164554,"score_spread":0.2174707648454054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}