{"id":"W4395452687","doi":"10.46471/gigabyte.119","title":"Genome assembly of the milky mangrove Excoecaria agallocha","year":2024,"lang":"en","type":"article","venue":"Gigabyte","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health PEI","funders":"Chinese University of Hong Kong","keywords":"Mangrove; Biology; Genome; Genome size; Evolutionary biology; Computational biology; Genetics; Ecology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002116762,0.0007649456,0.0006577314,0.001365723,0.0008729451,0.0008461584,0.0003855654,0.0004450828,0.00218631],"category_scores_gemma":[0.0007334652,0.0003595491,0.0008329442,0.001695832,0.0002126332,0.0003846291,0.0005924862,0.0007035144,0.001722294],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006366273,"about_ca_system_score_gemma":0.001143966,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01127614,"about_ca_topic_score_gemma":0.01179604,"domain_scores_codex":[0.9997807,0.00002198093,0.00001718251,0.0001007251,0.00004962175,0.000029858],"domain_scores_gemma":[0.9997446,0.0000503355,0.00004407906,0.00002987896,0.00007210034,0.00005902048],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000904731,0.00009392353,0.01035924,0.001233222,0.0001094471,0.001293893,0.001034422,0.003269373,0.9450497,0.0008358948,0.003672105,0.03214411],"study_design_scores_gemma":[0.0002494483,0.0007216954,0.4157283,0.0007439826,0.0009542819,0.00302566,0.002244995,0.03701217,0.279295,0.002488556,0.257241,0.0002949629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7950445,0.004519417,0.05909001,0.0006986083,0.00025731,0.0004923362,0.1275251,0.003615167,0.00875752],"genre_scores_gemma":[0.5476696,0.003129423,0.1189157,0.0002026179,0.000067874,0.0004959306,0.3164187,0.001903569,0.01119654],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01127614,"threshold_uncertainty_score":0.022421,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00914056587104999,"score_gpt":0.2266113307164554,"score_spread":0.2174707648454054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}