{"id":"W4396538978","doi":"10.1016/j.cbd.2024.101238","title":"Transcriptomic profiling of Rana [Lithobates] catesbeiana back skin during natural and thyroid hormone-induced metamorphosis under different temperature regimes with particular emphasis on innate immune system components","year":2024,"lang":"en","type":"article","venue":"Comparative Biochemistry and Physiology Part D Genomics and Proteomics","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency; University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; Alliance de recherche numérique du Canada; Genome British Columbia; Genome Canada","keywords":"Metamorphosis; Biology; Transcriptome; Innate immune system; Tadpole (physics); Lithobates; Immune system; Thyroid; Gene expression; Amphibian; Internal medicine; Cell biology; Gene; Endocrinology; Immunology; Ecology; Larva; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004867572,0.0002006126,0.0002145816,0.0003748639,0.0003073162,0.0002903249,0.0001306731,0.000204984,0.001262569],"category_scores_gemma":[0.00005356509,0.0001611074,0.0002255507,0.0003169614,0.0002359096,0.0001839013,0.0001613427,0.0002995686,0.0002437401],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001835615,"about_ca_system_score_gemma":0.0001654018,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002461571,"about_ca_topic_score_gemma":0.009211271,"domain_scores_codex":[0.9999367,0.000003521462,0.000002520126,0.00002913202,0.000012429,0.00001577933],"domain_scores_gemma":[0.9999444,0.000009130798,0.00001253811,0.000003375684,0.00001812043,0.00001236538],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001119792,0.00000782501,0.001486335,0.00003125921,0.000008647879,0.00005096362,0.00004571182,0.00002366036,0.9975017,0.00003206511,0.00003915992,0.0006606545],"study_design_scores_gemma":[0.00001795825,0.0002706818,0.8364813,0.00002546177,0.00008753858,0.0005177818,0.0006535452,0.0009757791,0.1575834,0.0001071724,0.003256412,0.0000229599],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943533,0.0007476113,0.0007920166,0.00005896434,0.00002064388,0.00002047333,0.002540641,0.00003024527,0.001436185],"genre_scores_gemma":[0.9822161,0.0007448864,0.001595657,0.0002302427,0.00001730513,0.00008981572,0.005537966,0.00003644483,0.009531583],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002461571,"threshold_uncertainty_score":0.004894435,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0139775743591412,"score_gpt":0.2201196305531944,"score_spread":0.2061420561940532,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}