{"id":"W4396588318","doi":"10.1158/1538-7445.sabcs23-po2-03-08","title":"Abstract PO2-03-08: Uncovering Novel Potential Prognostic Biomarkers in Basal-Like Breast Cancer using Transcriptomic Data of 1,899 Patients","year":2024,"lang":"en","type":"article","venue":"Cancer Research","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Canadian Navy","funders":"","keywords":"Breast cancer; Transcriptome; Basal (medicine); Medicine; Cancer; Oncology; Internal medicine; Computational biology; Biology; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000798294,0.0003765905,0.0006895764,0.001659367,0.0003155969,0.001023041,0.0004162512,0.0003443629,0.00499311],"category_scores_gemma":[0.001393964,0.0001439636,0.0004871659,0.002453691,0.0001802102,0.0002927149,0.0007644723,0.0002950291,0.001969826],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002404571,"about_ca_system_score_gemma":0.0007866477,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008252528,"about_ca_topic_score_gemma":0.001231135,"domain_scores_codex":[0.9994056,0.00007172462,0.00007390097,0.0002161598,0.0001469574,0.00008561944],"domain_scores_gemma":[0.9993128,0.0001821946,0.0001594453,0.0001095397,0.0001359967,0.0001000319],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004757453,0.0004257355,0.7013909,0.00191179,0.0006632625,0.001363774,0.0004204382,0.002760808,0.1313801,0.0007852946,0.03168442,0.1224561],"study_design_scores_gemma":[0.0001731893,0.0006957122,0.9094335,0.0001997786,0.0005837303,0.002346701,0.0004542666,0.005558253,0.02173074,0.001075608,0.05769413,0.0000543899],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7226232,0.00219861,0.004840333,0.0002780046,0.00005618725,0.0001395384,0.2661757,0.0006033652,0.003085071],"genre_scores_gemma":[0.5602041,0.001208495,0.00821454,0.0001852522,0.00008439804,0.0004960554,0.4275977,0.0001447042,0.001864644],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00499311,"threshold_uncertainty_score":0.01670361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0731588741731784,"score_gpt":0.3836798850369904,"score_spread":0.310521010863812,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}