{"id":"W4396591594","doi":"10.1158/1538-7445.sabcs23-po4-08-09","title":"Abstract PO4-08-09: Concordance analysis of paired breast cancer core needle biopsies and surgical excision samples using the Oncotype DX Breast Recurrence Score® assay","year":2024,"lang":"en","type":"article","venue":"Cancer Research","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Concordance; Medicine; Breast cancer; Core biopsy; Surgical excision; Oncology; Cancer; Internal medicine; Radiology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004977034,0.0003020027,0.0004450947,0.002564149,0.0004226227,0.0009189362,0.0005668635,0.0003623919,0.001942876],"category_scores_gemma":[0.00993662,0.0002581669,0.0003064884,0.001697719,0.0004862617,0.000283149,0.0007634319,0.0002910641,0.0005763642],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000347553,"about_ca_system_score_gemma":0.0004143394,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001642276,"about_ca_topic_score_gemma":0.002279431,"domain_scores_codex":[0.9926997,0.001781729,0.001184535,0.001610428,0.002469489,0.0002541497],"domain_scores_gemma":[0.9889857,0.004722066,0.002193402,0.00108013,0.002739573,0.0002791519],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001229045,0.0001243657,0.9283292,0.0002275972,0.0002404267,0.0004026887,0.0006446671,0.0004174607,0.05203917,0.0002390057,0.0005519101,0.01555451],"study_design_scores_gemma":[0.0000348346,0.0007511408,0.9398888,0.00003010747,0.0001498151,0.002884255,0.000488104,0.004046279,0.04953084,0.000128198,0.002047193,0.0000205138],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983691,0.0004915865,0.01039733,0.0000347522,0.00003684692,0.0002212203,0.001734702,0.0001307194,0.003261837],"genre_scores_gemma":[0.9874163,0.00009613579,0.009579296,0.00003488102,0.00001719041,0.0001433242,0.002005629,0.00003155863,0.0006755939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004977034,"threshold_uncertainty_score":0.02632135,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1251088815875231,"score_gpt":0.4215464137873042,"score_spread":0.2964375321997811,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}