{"id":"W4396670052","doi":"10.1093/plphys/kiae256","title":"Chloroplast biogenesis involves spatial coordination of nuclear and organellar gene expression in <i>Chlamydomonas</i>","year":2024,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Concordia University","funders":"Japan Society for the Promotion of Science; Canadian Institutes of Health Research; Concordia University; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Chlamydomonas; Chloroplast; Biogenesis; Nuclear gene; Biology; Gene expression; Gene; Chlamydomonas reinhardtii; Cell biology; Computational biology; Genetics; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001276043,0.0001510285,0.0001175881,0.00009718905,0.0002711856,0.0004067321,0.0001730509,0.0001206156,0.0003665495],"category_scores_gemma":[0.0002185282,0.0001706508,0.000151439,0.0001197628,0.0002889925,0.0001837693,0.0003101376,0.0002658883,0.0002656821],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001223646,"about_ca_system_score_gemma":0.0008652469,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009216351,"about_ca_topic_score_gemma":0.01408675,"domain_scores_codex":[0.9998704,0.00001066173,0.000007588146,0.00004431471,0.00003028625,0.0000367184],"domain_scores_gemma":[0.9998795,0.00002229969,0.00002614983,0.00002563916,0.00002239685,0.0000240654],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002848679,0.000003624931,0.0008341158,0.00001934804,0.000002034826,0.00003291216,0.00002398488,0.0001418875,0.9971643,0.0003587441,0.0000543405,0.001336176],"study_design_scores_gemma":[0.00002178626,0.0001221449,0.07147942,0.0000231609,0.0000316161,0.0004583484,0.0001813709,0.004817921,0.9130331,0.000664358,0.00914544,0.00002144465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874494,0.001083576,0.008075209,0.0001661089,0.00003650828,0.000009516019,0.0002112658,0.000155894,0.002812514],"genre_scores_gemma":[0.996367,0.0002461752,0.002279691,0.00003647401,0.000004583239,0.000008873975,0.000223839,0.00002146963,0.0008118816],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009216351,"threshold_uncertainty_score":0.01832539,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005745674182613297,"score_gpt":0.1993062504494474,"score_spread":0.1935605762668341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}