{"id":"W4396817679","doi":"10.1093/ve/veae040","title":"A parasite odyssey: An RNA virus concealed in <i>Toxoplasma gondii</i>","year":2024,"lang":"en","type":"article","venue":"Virus Evolution","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"Institute of Genetics; Temerty Faculty of Medicine, University of Toronto; University of British Columbia; University of Toronto","keywords":"Toxoplasma gondii; Virology; Parasite hosting; Biology; Computer science; Immunology; World Wide Web; Antibody","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005391015,0.0002853736,0.0003617035,0.0004778401,0.0002349169,0.00006080382,0.0002762253,0.0003612461,0.000389439],"category_scores_gemma":[0.0001506348,0.0002624833,0.0001095314,0.0006499561,0.0003737913,0.000433232,0.0001382349,0.0007272681,0.004125791],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004175077,"about_ca_system_score_gemma":0.0002021753,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001636043,"about_ca_topic_score_gemma":0.004448208,"domain_scores_codex":[0.9976542,0.0004444549,0.0004037491,0.0006359002,0.0000973288,0.0007643838],"domain_scores_gemma":[0.9992054,0.0002443496,0.00005841292,0.0003737886,0.00006255483,0.0000555217],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003148981,0.0001849166,0.003112342,0.0000612317,0.0001612004,0.0001027011,0.001002139,0.00004435611,0.9733738,0.005833754,0.0100521,0.005756538],"study_design_scores_gemma":[0.004714183,0.001523848,0.1050551,0.00048992,0.0001544377,0.0003421119,0.0009845465,0.001823185,0.4925415,0.004982263,0.385904,0.00148492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.975285,0.01826874,0.0003846415,0.0002980655,0.001394686,0.00048917,0.0002519992,0.0004688772,0.003158814],"genre_scores_gemma":[0.9954768,0.0006417444,0.00006917978,0.00008814327,0.00009609972,0.0001361661,0.0001398748,0.00003637459,0.003315651],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4808323,"threshold_uncertainty_score":0.9999827,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01712358483472325,"score_gpt":0.2961275782695348,"score_spread":0.2790039934348115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}