{"id":"W4396866914","doi":"10.1101/2024.05.09.593432","title":"Centromeres are Hotspots for Chromosomal Inversions and Breeding Traits in Mango","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Centromere; Biology; Evolutionary biology; Geography; Genetics; Chromosome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001591935,0.0001681697,0.0002494627,0.001042245,0.0004328113,0.0003105495,0.0001957253,0.0002237862,0.001474757],"category_scores_gemma":[0.0003231797,0.0001830095,0.0002321118,0.000709733,0.0002592843,0.0001921047,0.0004699382,0.0003142168,0.0002428778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002048182,"about_ca_system_score_gemma":0.0001469838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002318241,"about_ca_topic_score_gemma":0.004117122,"domain_scores_codex":[0.9998817,0.00001032292,0.000007531148,0.00004902965,0.00002727927,0.0000240858],"domain_scores_gemma":[0.9995924,0.00006671979,0.0002110117,0.00002861755,0.00004344348,0.00005776375],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000351314,0.00004044855,0.2535592,0.0001767438,0.0001062055,0.0005168658,0.0007822544,0.0003969595,0.7309802,0.0004174461,0.0001613091,0.01251096],"study_design_scores_gemma":[0.000007784286,0.00004524133,0.9887622,0.0000156776,0.00004496934,0.0004388051,0.0002546271,0.0005192208,0.008466618,0.00018984,0.001245176,0.000009880922],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984587,0.0002940628,0.0005694403,0.00002440393,0.000002527349,0.000003755733,0.000195757,0.00001782879,0.0004334534],"genre_scores_gemma":[0.9986821,0.00008832673,0.0005009448,0.00002274206,0.000003563286,0.000003847177,0.0003445439,0.000008273661,0.0003455762],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002318241,"threshold_uncertainty_score":0.004933596,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01998411198744966,"score_gpt":0.2045701444192458,"score_spread":0.1845860324317962,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}