{"id":"W4396914340","doi":"10.1093/ofid/ofae275","title":"Invasive Pneumococcal Disease Epidemiology and Serotype Replacement After the Introduction of the 13-Valent Pneumococcal Conjugate Vaccine in Ontario, Canada, 2007–2022","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Nova Scotia Health Authority; Public Health Ontario; University of Toronto","funders":"Public Health Ontario","keywords":"Pneumococcal disease; Medicine; Serotype; Pneumococcal conjugate vaccine; Epidemiology; Conjugate vaccine; Virology; Pneumococcal infections; Conjugate; Streptococcus pneumoniae; Microbiology; Pathogenic organism; Immunology; Antibiotics; Internal medicine; Antibody; Immunogenicity; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004070799,0.0002666984,0.0004687846,0.0001136,0.0002695839,0.0000531853,0.0001931298,0.00007480299,0.0009084062],"category_scores_gemma":[0.0006071622,0.0001567297,0.0001581485,0.0003241376,0.0001823379,0.0001760207,0.0004171185,0.0004994545,0.00001181022],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006808532,"about_ca_system_score_gemma":0.002318689,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.3968165,"about_ca_topic_score_gemma":0.936511,"domain_scores_codex":[0.9978812,0.0003642036,0.0005816488,0.0005441959,0.0002094922,0.0004192241],"domain_scores_gemma":[0.9985087,0.000340465,0.0001399559,0.0006167785,0.00009535973,0.0002987212],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005735835,0.0002373782,0.9825991,0.0001545203,0.00016837,0.00007132807,0.00008499482,0.0001890787,0.0006432717,0.0004683269,0.0145478,0.0002622773],"study_design_scores_gemma":[0.0008417415,0.0003284107,0.941874,0.0001933371,0.0003564374,0.000131494,0.0001063749,0.00008222141,0.00007456644,0.0008426412,0.05500298,0.0001657857],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9647052,0.0012466,0.000004318407,0.02975193,0.001467866,0.001938527,0.0001009156,0.00003544091,0.0007492561],"genre_scores_gemma":[0.9946051,0.0001557241,7.6447e-7,0.002921486,0.0002055322,0.0006340869,0.000042374,0.00002807644,0.00140684],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5396945,"threshold_uncertainty_score":0.994641,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01073473688516011,"score_gpt":0.2630262151506915,"score_spread":0.2522914782655313,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}