{"id":"W4396920294","doi":"10.21203/rs.3.rs-4362075/v1","title":"Inferring Enterovirus D68 Transmission Dynamics from the Genomic Data of Two 2022 North American outbreaks","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University; Public Health Ontario; University of British Columbia; Simon Fraser University; Public Health Agency of Canada; Sunnybrook Hospital","funders":"","keywords":"Outbreak; Virology; Transmission (telecommunications); Enterovirus; Biology; Dynamics (music); Computer science; Virus; Physics; Telecommunications","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006041177,0.0002863832,0.0002556255,0.0009601713,0.0005689809,0.0006774657,0.0003071361,0.00045779,0.0006271839],"category_scores_gemma":[0.001983941,0.0002294126,0.0004945123,0.001098245,0.0002233816,0.0003063263,0.000501423,0.0004033977,0.0001899721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00122447,"about_ca_system_score_gemma":0.001016214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1699744,"about_ca_topic_score_gemma":0.2189461,"domain_scores_codex":[0.9997807,0.00004822378,0.0000122093,0.00007381065,0.00002837697,0.00005672605],"domain_scores_gemma":[0.9993019,0.0002425587,0.0001447293,0.0000582917,0.000161307,0.00009120065],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002579144,0.00004836364,0.9707721,0.00006523548,0.000172714,0.0004078762,0.000466047,0.01126285,0.00380426,0.0002391915,0.002340812,0.01016273],"study_design_scores_gemma":[0.00002087272,0.00003043884,0.9444666,0.00004503673,0.0001032747,0.0001612206,0.001345713,0.04873494,0.0005279733,0.0003428412,0.004202441,0.00001874726],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963056,0.0001723332,0.000625854,0.0001016857,0.00000447926,0.000006090789,0.002324451,0.00002064738,0.0004388707],"genre_scores_gemma":[0.9885328,0.0001891792,0.001276733,0.00005854656,0.000008861296,0.00001117882,0.009733446,0.000008566437,0.0001807705],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1699744,"threshold_uncertainty_score":0.33797,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1124011002506591,"score_gpt":0.449125307994982,"score_spread":0.3367242077443229,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}