{"id":"W4396936472","doi":"10.1016/j.jfp.2024.100302","title":"Overcoming Microbial Inhibition of S. Sonnei Through the Exploitation of Genomically Predicted Antibiotic Resistance Profiles for the Development of Food Enrichment Media","year":2024,"lang":"en","type":"article","venue":"Journal of Food Protection","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada; Carleton University; Canadian Food Inspection Agency","funders":"","keywords":"Shigella sonnei; Microbiology; Shigella; Trimethoprim; Biology; Antibiotics; Antibiotic resistance; Streptomycin; Sulfadiazine; Food science; Salmonella; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006437688,0.00008306188,0.0001478985,0.00004941464,0.00008945729,0.00001203075,0.0001042915,0.00006401438,0.000001061201],"category_scores_gemma":[0.0003662755,0.00005082154,0.0001093727,0.0001408056,0.00008640414,0.00001444494,0.0000490219,0.000120956,5.088584e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004472445,"about_ca_system_score_gemma":0.0002344649,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002079754,"about_ca_topic_score_gemma":0.00007447977,"domain_scores_codex":[0.9989533,0.00008466829,0.0005213529,0.0001056925,0.0002314334,0.0001034835],"domain_scores_gemma":[0.9989709,0.00009365071,0.0004167901,0.00009704833,0.0004077882,0.00001387242],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005410273,0.00006104874,0.00001719015,0.0004566817,0.0003736091,1.121822e-7,0.002184281,0.00006573364,0.9937222,0.00009499382,0.0001609726,0.002322134],"study_design_scores_gemma":[0.000434431,0.001263573,0.001402279,0.0003336065,0.00005587327,0.000003761535,0.0009178802,0.00005872478,0.9942293,0.0003954434,0.0008557898,0.00004939753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9499394,0.00301259,0.0457709,0.0003219038,0.0001696979,0.0007369648,0.00002891473,0.000002736024,0.00001686098],"genre_scores_gemma":[0.9906647,0.0002315089,0.008863071,0.000005789009,0.000172703,0.00003687253,0.00000529373,0.00001019727,0.000009825145],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04072531,"threshold_uncertainty_score":0.2072442,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02862211010867434,"score_gpt":0.2719975700523186,"score_spread":0.2433754599436443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}