{"id":"W4396956422","doi":"10.1016/j.pt.2024.04.013","title":"Next-generation sequencing technologies for helminth diagnostics and surveillance in ruminants: shifting diagnostic barriers","year":2024,"lang":"en","type":"article","venue":"Trends in Parasitology","topic":"Helminth infection and control","field":"Veterinary","cited_by":33,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Livestock; Biotechnology; Biology; Agriculture; Sustainability; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003850241,0.0001849029,0.0003120473,0.000617649,0.00007930357,0.00006891057,0.0001013268,0.0002455162,0.00004098174],"category_scores_gemma":[0.002942883,0.0001831622,0.00004311078,0.0004803344,0.000131944,0.0001591718,0.00004550573,0.0002589152,0.00001366542],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001578445,"about_ca_system_score_gemma":0.00005092872,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001449719,"about_ca_topic_score_gemma":0.003081971,"domain_scores_codex":[0.9985782,0.0001257257,0.0003887358,0.0004422766,0.00006481173,0.0004002403],"domain_scores_gemma":[0.9977238,0.001990451,0.00004950355,0.0001717355,0.0000215112,0.00004305789],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007957416,0.00004978189,0.7047084,0.000130024,0.00004338978,0.001056034,0.001240351,0.000127684,0.004408525,0.006173006,0.0007641214,0.2812191],"study_design_scores_gemma":[0.007262049,0.004583924,0.5440749,0.001187671,0.0001315463,0.002165685,0.00769754,0.3972638,0.005729222,0.007096761,0.02037815,0.002428773],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921672,0.003330853,0.001215438,0.001274871,0.001007885,0.0002185856,0.00002485249,0.0003178307,0.0004424538],"genre_scores_gemma":[0.9986649,0.0004216654,0.0002782166,0.00007635802,0.000114965,0.0003430753,0.00002578498,0.00002352813,0.00005149166],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3971361,"threshold_uncertainty_score":0.7469137,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08402805550216572,"score_gpt":0.3732740580134759,"score_spread":0.2892460025113102,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}