{"id":"W4396970218","doi":"10.1093/bjs/znae118.012","title":"Spatial Transcriptomics Reveals Interaction of Injury-Derived Osteopontin with Mesothelial Cells in Serosal Scarring","year":2024,"lang":"en","type":"article","venue":"British journal of surgery","topic":"Bone and Dental Protein Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Osteopontin; Mesothelial Cell; Transcriptome; Pathology; Internal medicine; Gene; Biochemistry; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005772534,0.0001018578,0.0005509279,0.0002486631,0.00002468263,0.00004565526,0.00003688001,0.00006031605,0.00004265217],"category_scores_gemma":[0.00005782408,0.00009737442,0.00020283,0.0001877769,0.00006268696,0.0002608783,0.00001418949,0.0003706665,0.000002619358],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005957637,"about_ca_system_score_gemma":0.000126698,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004462364,"about_ca_topic_score_gemma":0.0001648594,"domain_scores_codex":[0.9986885,0.00005685724,0.0006885513,0.0001175581,0.0002919452,0.0001566349],"domain_scores_gemma":[0.9994446,0.0001210557,0.0001866642,0.00005439324,0.000126718,0.00006658195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004122734,0.0002947224,0.04222355,0.001129273,0.0004077635,0.007841358,0.0009605661,0.00001304311,0.7620167,0.000003558036,0.004956319,0.1760305],"study_design_scores_gemma":[0.003494917,0.001033894,0.1829363,0.04041021,0.0004632701,0.02057803,0.00228052,0.0001034507,0.7458815,0.0001666572,0.00213859,0.0005126238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994929,0.003485254,0.0002367081,0.0001792445,0.0008769693,0.0001231715,0.00002140192,0.00001262273,0.0001356148],"genre_scores_gemma":[0.9979161,0.001362307,0.000222413,0.00007009795,0.0003280107,0.000002499158,0.000001600676,0.000023644,0.00007332363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1755178,"threshold_uncertainty_score":0.3970813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01929394289787513,"score_gpt":0.2581022988168052,"score_spread":0.2388083559189301,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}