{"id":"W4397004000","doi":"10.17504/protocols.io.rm7vzjyj5lx1/v1","title":"NCBI submission protocol (BioSample/SRA) v1","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Zoonotic diseases and public health","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Protocol (science); Computer science; Raw data; World Wide Web; Scale (ratio); Information retrieval; Medicine; Programming language; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.01441093,0.002367744,0.003294695,0.006516332,0.004349013,0.007244414,0.004859958,0.003020659,0.5422613],"category_scores_gemma":[0.05629661,0.003252207,0.00214069,0.007544109,0.001466205,0.004845435,0.007544163,0.004694851,0.5707049],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001814842,"about_ca_system_score_gemma":0.008034175,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003369313,"about_ca_topic_score_gemma":0.00439731,"domain_scores_codex":[0.9868128,0.003608772,0.003188553,0.001894245,0.003342187,0.001153465],"domain_scores_gemma":[0.9645519,0.008294489,0.001758572,0.01178727,0.01174351,0.001864328],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002726368,0.0000330304,0.0002751632,0.001079192,0.00002698278,0.00008300524,0.0001444175,0.00005636672,0.002824591,0.001532988,0.9821715,0.01150008],"study_design_scores_gemma":[0.0001630182,0.00005179621,0.001016616,0.0004132476,0.00002071747,0.0001884882,0.0001641489,0.0001527273,0.003202972,0.003484878,0.991073,0.00006841576],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"protocol","genre_scores_codex":[0.001017323,0.0004555157,0.04253595,0.002209929,0.002783123,0.005302309,0.8612733,0.05696022,0.02746234],"genre_scores_gemma":[0.002831166,0.0005637083,0.04682751,0.001868855,0.000560655,0.01404812,0.8655291,0.0350629,0.03270795],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.5422613,"threshold_uncertainty_score":0.6529087,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05533863002535987,"score_gpt":0.4053419359972933,"score_spread":0.3500033059719334,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}