{"id":"W4398167533","doi":"10.3201/eid3006.231033","title":"Outbreak of Highly Pathogenic Avian Influenza A(H5N1) Virus in Seals, St. Lawrence Estuary, Quebec, Canada1","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Wildlife Health Cooperative; Oxford Nanopore Technologies","keywords":"Influenza A virus subtype H5N1; Outbreak; Virology; Highly pathogenic; Influenza A virus; Biology; Virus; Estuary; Pandemic; Avian influenza virus; Geography; Zoology; Coronavirus disease 2019 (COVID-19); Fishery; Medicine; Infectious disease (medical specialty)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002903271,0.0003697733,0.0006265657,0.0007596965,0.0001645374,0.00006840261,0.0001867892,0.0001068252,0.000286312],"category_scores_gemma":[0.0007418591,0.0003375358,0.000250119,0.001170726,0.000277332,0.0002764574,0.0002010208,0.0004495028,0.00008670459],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006439037,"about_ca_system_score_gemma":0.001253046,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.14548,"about_ca_topic_score_gemma":0.1177073,"domain_scores_codex":[0.9970853,0.0001523344,0.000657251,0.0005857206,0.0007801261,0.0007392789],"domain_scores_gemma":[0.9985024,0.0002852964,0.00009583307,0.000518904,0.0002330462,0.0003645519],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003790846,0.0007027558,0.9398952,0.002833998,0.0008912898,0.001807371,0.00204604,0.0006198565,0.01433268,0.002107408,0.01349748,0.02088686],"study_design_scores_gemma":[0.002388695,0.0005182445,0.9060469,0.001887744,0.0004880951,0.00005620161,0.0004054744,0.0008143086,0.002103018,0.000670118,0.083887,0.0007342392],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9717815,0.0227598,0.00002188192,0.0005281602,0.000451418,0.0006829374,0.0004539916,0.0004448408,0.002875507],"genre_scores_gemma":[0.9974047,0.0008633166,0.000020357,0.0007172649,0.0002342143,0.0001552491,0.00004424015,0.00006890631,0.0004917862],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07038952,"threshold_uncertainty_score":0.9999077,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02611653810866386,"score_gpt":0.333312808827103,"score_spread":0.3071962707184391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}