{"id":"W4398167864","doi":"10.1128/spectrum.03470-23","title":"Functional genomic analysis of the isolated potential probiotic <i>Lactobacillus delbrueckii</i> subsp. <i>indicus</i> TY-11 and its comparison with other <i>Lactobacillus delbrueckii</i> strains","year":2024,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; National Health and Medical Research Council","keywords":"Lactobacillus; Probiotic; Biology; Microbiology; Lactobacillus delbrueckii subsp. bulgaricus; Lactobacillaceae; Bacteria; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000134525,0.0006374166,0.0005617901,0.000922052,0.0002354369,0.0005308064,0.0002070619,0.0002705062,0.0008505048],"category_scores_gemma":[0.0003469637,0.000151244,0.0007192183,0.001644585,0.000179789,0.0002280783,0.0003414435,0.000405418,0.0004752858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00021071,"about_ca_system_score_gemma":0.0003374036,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00235736,"about_ca_topic_score_gemma":0.00126493,"domain_scores_codex":[0.9998161,0.0000206899,0.00002075987,0.00006055129,0.00004141492,0.00004055432],"domain_scores_gemma":[0.9997863,0.00004347964,0.00006271664,0.0000129832,0.00005731824,0.00003726128],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003994107,0.00009115791,0.00528844,0.00024786,0.00002904413,0.0002491476,0.0001681458,0.000198588,0.9890232,0.00005046351,0.0000864942,0.00416801],"study_design_scores_gemma":[0.00005371293,0.001559187,0.5247454,0.0001668536,0.000595285,0.002353409,0.002189942,0.00387553,0.4520806,0.0001556459,0.01214249,0.0000819176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.982878,0.001147652,0.002262537,0.0001372146,0.00003108727,0.00009241493,0.01200779,0.00004330537,0.001400146],"genre_scores_gemma":[0.9612994,0.001116,0.007038947,0.0001254337,0.00001997033,0.0001526254,0.028129,0.00005398451,0.002064724],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00235736,"threshold_uncertainty_score":0.004687309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0113008304849121,"score_gpt":0.1949415889743063,"score_spread":0.1836407584893942,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}