{"id":"W4398222983","doi":"10.3390/plants13111434","title":"Plant Immunity: At the Crossroads of Pathogen Perception and Defense Response","year":2024,"lang":"en","type":"article","venue":"Plants","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Pattern recognition receptor; Effector; Immune system; Innate immune system; Immunity; Cell biology; Plant Immunity; Pathogen-associated molecular pattern; Gene silencing; Acquired immune system; Signal transduction; Receptor; Autophagy; Pathogen; Immunology; Arabidopsis; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003636777,0.00006971933,0.00007876562,0.00001091045,0.0002464663,0.0000617569,0.0000990916,0.00004524372,0.0003769256],"category_scores_gemma":[0.00002865668,0.00002141007,0.00003803507,0.00007141769,0.00006623082,0.00007069363,0.00008915616,0.0001184415,0.00007169694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001839314,"about_ca_system_score_gemma":0.000005257002,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004750191,"about_ca_topic_score_gemma":0.000542741,"domain_scores_codex":[0.9994431,0.0001517499,0.0001152401,0.0001046559,0.00007130288,0.0001139383],"domain_scores_gemma":[0.999298,0.0005847517,0.00002724341,0.00005011363,0.0000136208,0.00002622488],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003467554,0.00001827292,0.001553311,0.000005063929,0.00001155833,0.000009823103,0.0004952126,2.819995e-7,0.9798618,0.000007254428,0.001362074,0.01632859],"study_design_scores_gemma":[0.00007150052,0.0001805691,0.8870099,0.0001108848,0.00001650246,0.0006472233,0.001587819,0.0001396157,0.01300193,0.00008138146,0.09702709,0.0001255855],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969774,0.0006066533,3.68918e-7,0.0003820017,0.0001292559,0.00006625251,0.001596527,0.00002704757,0.0002144809],"genre_scores_gemma":[0.9985703,0.0004047839,0.000004988844,0.00006111867,0.00003178813,0.000003543478,0.0002065891,5.522063e-7,0.0007163729],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9668599,"threshold_uncertainty_score":0.4127071,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02435118601561072,"score_gpt":0.2396216368143482,"score_spread":0.2152704507987375,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}