{"id":"W4398223076","doi":"10.3390/microorganisms12061048","title":"Latent Tuberculosis Infection Is Associated with an Enrichment of Short-Chain Fatty Acid-Producing Bacteria in the Stool of Women Living with HIV","year":2024,"lang":"en","type":"article","venue":"Microorganisms","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"European and Developing Countries Clinical Trials Partnership; National Institute of Biomedical Imaging and Bioengineering; National Institute of Allergy and Infectious Diseases; National Research Foundation; University of Cape Town; South African Medical Research Council; Deutscher Akademischer Austauschdienst; Fogarty International Center; Harry Crossley Foundation","keywords":"Human immunodeficiency virus (HIV); Bacteria; Tuberculosis; Acid-fast; Latent tuberculosis; Fatty acid; Microbiology; Medicine; Immunology; Virology; Biology; Mycobacterium tuberculosis; Biochemistry; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002121886,0.0002008605,0.0002452476,0.0003764182,0.0003987426,0.0005946819,0.0001161124,0.0002503524,0.003166533],"category_scores_gemma":[0.001090539,0.0002562296,0.0002465128,0.0005512938,0.000184687,0.0002515113,0.0004997294,0.0004341651,0.0003227034],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001046788,"about_ca_system_score_gemma":0.0001338027,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001690725,"about_ca_topic_score_gemma":0.002080012,"domain_scores_codex":[0.9997993,0.00005187295,0.00001851405,0.00006573722,0.00002693567,0.00003765896],"domain_scores_gemma":[0.9997019,0.00006685143,0.0001308082,0.0000205909,0.00003234535,0.00004748703],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008748852,0.00005941791,0.9719104,0.0001800005,0.0001256091,0.0003133277,0.0005560244,0.00007235716,0.01414838,0.0000337504,0.0004451516,0.01128066],"study_design_scores_gemma":[0.00001701598,0.0002077035,0.9952827,0.0000708728,0.00007743673,0.0009178526,0.0008094163,0.0003715675,0.001117932,0.0001044192,0.001013705,0.000009399679],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974154,0.001244431,0.0002267109,0.00007011071,0.00001077692,0.000007884392,0.0006704505,0.00001105984,0.0003431777],"genre_scores_gemma":[0.9983797,0.0004003562,0.0002415529,0.0000712021,0.00001102451,0.00001010469,0.000599585,0.000006266935,0.0002802108],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003166533,"threshold_uncertainty_score":0.01059312,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007865241577859493,"score_gpt":0.23160697661057,"score_spread":0.2237417350327105,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}