{"id":"W4399172521","doi":"10.3390/agronomy14061183","title":"Genome-Wide Association Study and Candidate Gene Mining of Seed Size Traits in Soybean","year":2024,"lang":"en","type":"article","venue":"Agronomy","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Science Basic Research Program of Shaanxi Province; National Natural Science Foundation of China","keywords":"Biology; Candidate gene; Genome-wide association study; Quantitative trait locus; Locus (genetics); Genetic architecture; Genetics; Gene; Single-nucleotide polymorphism; Linkage disequilibrium; Genetic association; Genome; Allele; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000691732,0.0002758855,0.0003403086,0.0009738638,0.0003507123,0.0002906309,0.000195328,0.000252671,0.0008244361],"category_scores_gemma":[0.0005094444,0.0001665189,0.0008919559,0.001430954,0.0001784599,0.0001107034,0.0002854104,0.0003352025,0.0001115668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001652322,"about_ca_system_score_gemma":0.0003308311,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002956958,"about_ca_topic_score_gemma":0.005895709,"domain_scores_codex":[0.9995634,0.00006558748,0.00005223537,0.0002205139,0.0000619348,0.00003637496],"domain_scores_gemma":[0.9996378,0.0001105209,0.0001006114,0.00003591304,0.00004164607,0.00007358743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009469122,0.00009188004,0.8960763,0.0001675181,0.0009854948,0.001209244,0.0003092085,0.0004848438,0.08463836,0.0002889892,0.0003376064,0.01446364],"study_design_scores_gemma":[0.00004032109,0.00007798027,0.9957777,0.0000063034,0.0003812049,0.0004009931,0.00008409833,0.001302668,0.001193938,0.00008906535,0.0006374407,0.000008292383],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977663,0.0004496338,0.0009270268,0.00004846367,0.00001073732,0.000008330181,0.0005461707,0.00001420482,0.0002292453],"genre_scores_gemma":[0.9973973,0.0002235821,0.001057777,0.00004120994,0.000008336311,0.00001474585,0.0009809197,0.000008256116,0.0002679502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002956958,"threshold_uncertainty_score":0.005879462,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01216293244621438,"score_gpt":0.2103618345545883,"score_spread":0.198198902108374,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}