{"id":"W4399184600","doi":"10.3390/ani14111609","title":"Genome Sequence Comparisons between Small and Large Colony Phenotypes of Equine Clinical Isolates of Arcanobacterium hippocoleae","year":2024,"lang":"en","type":"article","venue":"Animals","topic":"Diphtheria, Corynebacterium, and Tetanus","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island","funders":"Atlantic Veterinary College","keywords":"Biology; Genetics; Genome; Gene; Housekeeping gene; Whole genome sequencing; Phenotype; Ribosomal RNA; GenBank; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003718541,0.0001522377,0.0003807945,0.00003822339,0.00002602621,0.00002431268,0.0001800219,0.0001548304,0.00005482239],"category_scores_gemma":[0.00005781377,0.0001398346,0.0001059293,0.00008246935,0.0001913985,0.000005242016,0.0001705695,0.00009485849,0.000007757989],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000531524,"about_ca_system_score_gemma":0.00009143446,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002599838,"about_ca_topic_score_gemma":0.00004182405,"domain_scores_codex":[0.9988232,0.00008232733,0.0004670123,0.0003340984,0.00006267562,0.0002306343],"domain_scores_gemma":[0.9993913,0.00006906419,0.0001280221,0.0002441501,0.00008422266,0.00008321285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009055449,0.00006166505,0.06177033,0.0001518329,0.0001938512,0.000003404158,0.00006569462,2.878473e-7,0.9365227,0.0001775494,0.0001077994,0.0008542928],"study_design_scores_gemma":[0.001107752,0.005798672,0.5396953,0.0001830935,0.0003383233,0.00001907014,0.0001483404,0.00005432954,0.2454505,0.0003729305,0.2062519,0.0005797803],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955161,0.002629309,0.0002512249,0.00007879445,0.0001354278,0.0001841663,0.0004472198,0.00001721623,0.0007405103],"genre_scores_gemma":[0.9985067,0.000354868,0.000473323,0.0000467169,0.0002130667,0.00000831806,0.0001160065,0.00002329052,0.0002577227],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6910722,"threshold_uncertainty_score":0.5702289,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05389814400805444,"score_gpt":0.331413753494895,"score_spread":0.2775156094868406,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}