{"id":"W4399298391","doi":"10.26434/chemrxiv-2024-rt3sh","title":"Discovery of megapolipeptins by genome mining of a Burkholderiales bacteria collection","year":2024,"lang":"en","type":"preprint","venue":"ChemRxiv","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick; Simon Fraser University","funders":"National Institute of General Medical Sciences","keywords":"Genome; Computational biology; Biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005736448,0.0006213709,0.0006132754,0.001321329,0.0004267002,0.0009726404,0.0004096758,0.0003437959,0.0006719297],"category_scores_gemma":[0.0008693712,0.000266745,0.0005575382,0.00226285,0.0001820304,0.0003834045,0.0006309914,0.0006518861,0.0006738366],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002943863,"about_ca_system_score_gemma":0.0006234389,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00171663,"about_ca_topic_score_gemma":0.002179821,"domain_scores_codex":[0.9996272,0.00004202448,0.00004172346,0.0001141451,0.0001241863,0.00005069483],"domain_scores_gemma":[0.9995074,0.00009178863,0.0001081639,0.00008540926,0.0001172595,0.00008988658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003025128,0.0001128822,0.01468797,0.0002969489,0.00007028654,0.0004709432,0.0002162992,0.001138046,0.9586824,0.0001928316,0.0005259369,0.02330303],"study_design_scores_gemma":[0.0001214327,0.001038134,0.2049794,0.0001396586,0.0003874615,0.00406194,0.0008422691,0.01106899,0.736173,0.0006871509,0.04040882,0.00009162973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9646198,0.001327991,0.0127938,0.0001887879,0.00001698676,0.0001857609,0.01928627,0.0003840706,0.001196544],"genre_scores_gemma":[0.8304905,0.002604051,0.07615066,0.0001580383,0.00002942394,0.0002563965,0.08809339,0.0002907168,0.001926822],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00171663,"threshold_uncertainty_score":0.00341326,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01963510025702693,"score_gpt":0.2342884886783592,"score_spread":0.2146533884213322,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}