{"id":"W4399353861","doi":"10.1186/s40104-024-01030-7","title":"Bacteria colonization and gene expression related to immune function in colon mucosa is associated with growth in neonatal calves regardless of live yeast supplementation","year":2024,"lang":"en","type":"article","venue":"Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology","topic":"Animal health and immunology","field":"Veterinary","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Alberta; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; University of Alberta","keywords":"Faecalibacterium prausnitzii; Biology; Bifidobacterium; Immune system; Intestinal mucosa; Bacteria; Microbiology; Lactobacillus; Bifidobacterium longum; Colostrum; Diarrhea; Saccharomyces boulardii; Immunology; Feces; Probiotic; Medicine; Internal medicine; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001781699,0.0002747875,0.0003858566,0.0005866913,0.0002471909,0.0005281463,0.0001599478,0.0003044896,0.001201056],"category_scores_gemma":[0.0003537634,0.0001870845,0.0002971729,0.0004278549,0.0002795879,0.0002462831,0.0002993248,0.0006118089,0.000191345],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005685843,"about_ca_system_score_gemma":0.0003576938,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005818762,"about_ca_topic_score_gemma":0.009660499,"domain_scores_codex":[0.9996309,0.00002327058,0.0000168866,0.000141451,0.00008446531,0.0001029022],"domain_scores_gemma":[0.9994899,0.00006337706,0.0001645625,0.00001770582,0.0001146749,0.0001498737],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001140744,0.00005242093,0.04118031,0.0001025066,0.0000342887,0.0001159337,0.0001803098,0.00004972196,0.9539906,0.00002529651,0.0000700934,0.003057638],"study_design_scores_gemma":[0.000008568174,0.000535707,0.9342569,0.00002673657,0.00008244079,0.0001704412,0.0006939166,0.0003201882,0.06309443,0.00003812672,0.0007562984,0.00001631348],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972644,0.001087557,0.0004062454,0.00002837225,0.000007488189,0.000007536691,0.0008822944,0.000009446081,0.0003066469],"genre_scores_gemma":[0.9954435,0.0006374021,0.0006115912,0.00008726057,0.000005375483,0.00003497922,0.001269768,0.00001284506,0.001897379],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005818762,"threshold_uncertainty_score":0.0115698,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01625000463347514,"score_gpt":0.2902591754883389,"score_spread":0.2740091708548638,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}