{"id":"W4399484712","doi":"10.1093/gbe/evae122","title":"Telomere-to-telomere Genome Assembly of the Clubroot Pathogen <i>Plasmodiophora Brassicae</i>","year":2024,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canola Council of Canada; Fonds de recherche du Québec – Nature et technologies; Alberta Canola Producers Commission; Université Laval","keywords":"Clubroot; Biology; Telomere; Genome; Genetics; Pathogen; Gene; Botany; Brassica","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004466706,0.0008375444,0.000843473,0.001257654,0.001116451,0.001052498,0.0006733894,0.0007096045,0.004661938],"category_scores_gemma":[0.001192137,0.0005987678,0.001044834,0.002174042,0.0002847959,0.0006137553,0.0007359571,0.001852197,0.004225695],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007873658,"about_ca_system_score_gemma":0.001541425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01258079,"about_ca_topic_score_gemma":0.02062881,"domain_scores_codex":[0.999741,0.00002228973,0.00001686506,0.0001170743,0.00007195817,0.00003064654],"domain_scores_gemma":[0.9994652,0.0001558706,0.00008806001,0.00005723484,0.000135462,0.00009816714],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007342112,0.00008933815,0.003902337,0.001818539,0.0001342823,0.0007779786,0.00107987,0.00349678,0.9426493,0.001289261,0.0112523,0.03277584],"study_design_scores_gemma":[0.0004288073,0.0007038786,0.2248824,0.001162532,0.0007259059,0.002153254,0.001082412,0.03092363,0.3607884,0.005529234,0.371248,0.0003715153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.4772394,0.007451995,0.128553,0.001251716,0.0005148191,0.0004422044,0.361936,0.008676648,0.01393433],"genre_scores_gemma":[0.2648214,0.003940098,0.188773,0.0005368672,0.000120165,0.0004624837,0.5274799,0.005177808,0.008688307],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01258079,"threshold_uncertainty_score":0.02501512,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008672810261148977,"score_gpt":0.2120112854673498,"score_spread":0.2033384752062009,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}