{"id":"W4399505669","doi":"10.1101/2024.06.09.597944","title":"Sex-biased gene expression across tissues reveals unexpected differentiation in the gills of the threespine stickleback","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Stickleback; Biology; Gene; Gene expression; Expression (computer science); Sexual differentiation; Evolutionary biology; Gill; Cell biology; Genetics; Fish <Actinopterygii>; Fishery","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005352496,0.0001406182,0.0001687634,0.0004375874,0.0002828435,0.0002871975,0.00007613855,0.0002286799,0.001065639],"category_scores_gemma":[0.00009965598,0.0001147081,0.000194105,0.0002548757,0.0002118336,0.0001159189,0.0002499657,0.0001899772,0.0002111454],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001445621,"about_ca_system_score_gemma":0.000120277,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002016806,"about_ca_topic_score_gemma":0.00383578,"domain_scores_codex":[0.999948,0.000002909402,0.000003026084,0.00002419122,0.00001015076,0.00001171469],"domain_scores_gemma":[0.999905,0.00001505226,0.00002802539,0.000007620543,0.00002064337,0.00002365781],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009675608,0.000006995979,0.02518018,0.0000482717,0.00002075283,0.00006771129,0.0001033399,0.0000555562,0.9723731,0.00002995757,0.00007153532,0.001945797],"study_design_scores_gemma":[0.000002453297,0.0000715944,0.9841782,0.000005052689,0.00001741669,0.0001438402,0.0001559902,0.0002651221,0.01466677,0.0000515158,0.000435493,0.000006391901],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976254,0.0002407187,0.0005009932,0.00002096302,0.000005395801,0.0000051393,0.001229525,0.00002140922,0.0003504567],"genre_scores_gemma":[0.9962579,0.0001184978,0.0008334217,0.00007058524,0.000005818975,0.0000165454,0.001623657,0.00001879264,0.001054783],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002016806,"threshold_uncertainty_score":0.004010081,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01345376833458118,"score_gpt":0.2576732361875937,"score_spread":0.2442194678530125,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}