{"id":"W4399730738","doi":"10.1093/ofid/ofae343","title":"HIV Subtypes and Drug-resistance-associated Mutations in US Blood Donors, 2015–2020","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Food and Drug Administration; Office of the Assistant Secretary for Health; Hamilton Health Sciences Foundation; National Institutes of Health; OPEC Fund for International Development","keywords":"Reverse transcriptase; Virology; Genotype; Population; Medicine; Drug resistance; Human immunodeficiency virus (HIV); Polymerase chain reaction; Nucleoside Reverse Transcriptase Inhibitor; Nested polymerase chain reaction; Biology; Genetics; Viral load; Gene; Antiretroviral therapy","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007979745,0.0001707287,0.0001677981,0.00076518,0.000372539,0.0004447461,0.0002962188,0.0002521146,0.001980096],"category_scores_gemma":[0.001347873,0.0001519093,0.0001970551,0.00130296,0.0002182737,0.0003113731,0.0003496525,0.0003706183,0.0003519527],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007732467,"about_ca_system_score_gemma":0.0007155508,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02727729,"about_ca_topic_score_gemma":0.02507255,"domain_scores_codex":[0.999673,0.00005356913,0.00005252054,0.00007673606,0.00007630042,0.00006783323],"domain_scores_gemma":[0.9994342,0.0000551337,0.0002570206,0.00002617968,0.0001232487,0.0001043229],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007416821,0.00001574214,0.9954256,0.00002170678,0.00001947197,0.00006370929,0.00007581121,0.00006913956,0.0001143045,0.00004914249,0.001028966,0.003042276],"study_design_scores_gemma":[0.000005013358,0.00003201077,0.9969822,0.00004199995,0.00002091203,0.000351498,0.0004108447,0.0002252094,0.00009668445,0.0000605209,0.001768623,0.000004427176],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897905,0.001634343,0.0001233182,0.0002174203,0.00003194623,0.00001559637,0.007126276,0.00001174246,0.001048871],"genre_scores_gemma":[0.9948773,0.0005583132,0.0001311443,0.0001281978,0.00002001632,0.00001691463,0.003852399,0.000003224484,0.0004125602],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02727729,"threshold_uncertainty_score":0.05423707,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005457130036993526,"score_gpt":0.2618378892408533,"score_spread":0.2563807592038597,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}