{"id":"W4399881501","doi":"10.1016/j.heliyon.2024.e33372","title":"Decoding the resistome, virulome and mobilome of clinical versus aquatic Acinetobacter baumannii in southern Romania","year":2024,"lang":"en","type":"article","venue":"Heliyon","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Ontario Ministry of Research and Innovation; Unitatea Executiva pentru Finantarea Invatamantului Superior, a Cercetarii, Dezvoltarii si Inovarii; Ministerul Cercetării, Inovării şi Digitalizării","keywords":"Resistome; Acinetobacter baumannii; Mobile genetic elements; Biology; Antibiotic resistance; Microbiology; Plasmid; Antibiotics; Genetics; Gene; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003566854,0.000303798,0.000461616,0.001382653,0.0003270731,0.0009028328,0.0002216783,0.0003119296,0.0005008407],"category_scores_gemma":[0.0008694403,0.0002314054,0.0003326893,0.001386393,0.0004073894,0.0003113683,0.0006954836,0.0002314391,0.0002246011],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002243556,"about_ca_system_score_gemma":0.00035317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003493426,"about_ca_topic_score_gemma":0.00476825,"domain_scores_codex":[0.999644,0.00008604518,0.00003583819,0.0000994016,0.00006067785,0.00007397799],"domain_scores_gemma":[0.9997764,0.00004735507,0.00008434832,0.00002199625,0.00005116624,0.00001872757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000474346,0.00008357349,0.5071963,0.0004322497,0.0001346314,0.0009173913,0.002984472,0.001293331,0.4405216,0.0002680597,0.0002931071,0.04540084],"study_design_scores_gemma":[0.000005333851,0.0001705235,0.9768561,0.00006926681,0.0000641794,0.001356868,0.002487856,0.0009136712,0.01381469,0.00008495541,0.004159242,0.0000173276],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975938,0.0007221557,0.0004929379,0.00005380177,0.000004971693,0.00001228383,0.0004841275,0.000005278201,0.0006304998],"genre_scores_gemma":[0.9967295,0.0006312056,0.001381895,0.00005666219,0.000007250685,0.00001897795,0.0008219834,0.00001188933,0.0003406661],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003493426,"threshold_uncertainty_score":0.006946206,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02998669470441901,"score_gpt":0.3316389234691755,"score_spread":0.3016522287647564,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}