{"id":"W4399886761","doi":"10.7554/elife.98058.sa2","title":"Author response: Copy number variation and population-specific immune genes in the model vertebrate zebrafish","year":2024,"lang":"en","type":"peer-review","venue":"","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Zebrafish; Vertebrate; Copy-number variation; Biology; Evolutionary biology; Variation (astronomy); Gene; Population; Genetics; Computational biology; Genome; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009495418,0.0003189529,0.000413921,0.0004204856,0.00048881,0.0006328443,0.0006149515,0.001504192,0.05233476],"category_scores_gemma":[0.004581702,0.0002296866,0.0004626195,0.0003985518,0.0005060891,0.0005711142,0.0008512561,0.0008519746,0.008404175],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00111471,"about_ca_system_score_gemma":0.0006016063,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004295829,"about_ca_topic_score_gemma":0.006805175,"domain_scores_codex":[0.9993316,0.00008681017,0.000037479,0.000250267,0.0002279852,0.00006577224],"domain_scores_gemma":[0.9991434,0.0002827577,0.0001363197,0.0001104071,0.0002251614,0.0001019369],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001240859,0.0000541771,0.0335806,0.0009962081,0.0002460492,0.001161047,0.0005361902,0.007649382,0.09497719,0.01413273,0.7760616,0.06936397],"study_design_scores_gemma":[0.001052391,0.0006294228,0.1421359,0.0005197036,0.0002712993,0.002507668,0.001605781,0.02397929,0.04154827,0.02252799,0.7628728,0.0003495446],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"other","genre_scores_codex":[0.3499846,0.00993841,0.08715299,0.1752269,0.03921484,0.001013604,0.1268442,0.01731444,0.19331],"genre_scores_gemma":[0.776771,0.00218368,0.0180447,0.0267815,0.001358006,0.001160335,0.0148161,0.002939059,0.1559456],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.05233476,"threshold_uncertainty_score":0.1750772,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0380294189518019,"score_gpt":0.3570293800118108,"score_spread":0.3189999610600089,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}