{"id":"W4399932709","doi":"10.3201/eid3007.231594","title":"Genomic Epidemiology of Large Blastomycosis Outbreak, Ontario, Canada, 2021","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Outbreak; Epidemiology; Virology; Molecular epidemiology; Blastomycosis; Medicine; Biology; Genetics; Genotype; Immunology; Pathology; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001654823,0.0002588779,0.00019652,0.001103355,0.001543088,0.0008064205,0.0003221326,0.0002208962,0.001005957],"category_scores_gemma":[0.0005185194,0.0001609984,0.0001896395,0.002794832,0.0004816646,0.0001214167,0.0004091635,0.0003208493,0.00009115767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01412352,"about_ca_system_score_gemma":0.01944152,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9824057,"about_ca_topic_score_gemma":0.9913476,"domain_scores_codex":[0.9997651,0.00001146977,0.0000069959,0.00004623648,0.0000798466,0.00009031417],"domain_scores_gemma":[0.9995906,0.00002105431,0.00008675387,0.00001260533,0.0001951085,0.0000939512],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002752163,0.00005065042,0.9504023,0.0001344724,0.00007857919,0.001109338,0.002571236,0.001493331,0.01829967,0.0006948411,0.004640592,0.02024978],"study_design_scores_gemma":[0.000004043192,0.00001370259,0.9950836,0.00001791814,0.00001239434,0.0001299137,0.001455977,0.0005425517,0.0002714704,0.00005340804,0.002409647,0.000005443221],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9842241,0.0007605358,0.0008478231,0.0005141685,0.000009817447,0.00008394221,0.009521343,0.00002993666,0.004008306],"genre_scores_gemma":[0.9925096,0.0006751718,0.001129768,0.0001345388,0.000003853423,0.00001763274,0.004173127,0.000006387691,0.0013497],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01759428,"threshold_uncertainty_score":0.1024738,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01223236781658866,"score_gpt":0.2799515683503779,"score_spread":0.2677192005337893,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}