{"id":"W4400004468","doi":"10.1128/mra.00403-24","title":"Circular metagenome-assembled genome of <i>Candidatus</i> Cloacimonadota recovered from anaerobic digestion sludge","year":2024,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Pacific Institute for Climate Solutions","keywords":"Metagenomics; Contig; Mesophile; Candidatus; Genome; Anaerobic digestion; Biology; Computational biology; Microbiology; Genetics; Bacteria; Gene; Methane; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002230322,0.0006702029,0.0004742047,0.001195514,0.0005239392,0.0006601605,0.0003375777,0.0004252396,0.001055575],"category_scores_gemma":[0.0004896419,0.0001994075,0.0006081979,0.001836736,0.0001739445,0.000312423,0.0004585924,0.0006407855,0.0004968009],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003484305,"about_ca_system_score_gemma":0.0009049062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006171948,"about_ca_topic_score_gemma":0.005887604,"domain_scores_codex":[0.9997931,0.00001705746,0.00001873485,0.00006839356,0.00006318135,0.00003955515],"domain_scores_gemma":[0.9997073,0.00004605954,0.0000589821,0.00003683565,0.00008755481,0.00006323391],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006731535,0.00007741375,0.004100667,0.000297135,0.00004235694,0.0002460148,0.0001664818,0.0004020639,0.9868434,0.00009938038,0.0004309772,0.006621045],"study_design_scores_gemma":[0.0001322762,0.001066067,0.1789127,0.0001515493,0.0004726471,0.001932243,0.001245567,0.007819396,0.7735484,0.0003032417,0.03426388,0.0001520665],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9483472,0.0009837536,0.007874327,0.0001578115,0.00007591502,0.0001473363,0.04040505,0.0005328033,0.001475766],"genre_scores_gemma":[0.7516968,0.001116679,0.03434515,0.0001670963,0.00003981793,0.0001507992,0.209638,0.0003532972,0.002492413],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006171948,"threshold_uncertainty_score":0.01227206,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0103946880922703,"score_gpt":0.2223426663429143,"score_spread":0.211947978250644,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}