{"id":"W4400004923","doi":"10.1128/spectrum.00600-24","title":"A case for implementing an HSV1/2, VZV, and syphilis lesion panel in Manitoba, Canada","year":2024,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of Manitoba; Manitoba Health","funders":"Canadian Institutes of Health Research","keywords":"Syphilis; Medicine; Treponema; Mucocutaneous zone; Public health; Lesion; Serology; Incidence (geometry); Internal medicine; Immunology; Virology; Surgery; Pathology; Disease; Antibody; Human immunodeficiency virus (HIV)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001656641,0.0001552459,0.00025502,0.0001128989,0.00008589892,0.00002273409,0.00003592974,0.00007891468,0.00007746938],"category_scores_gemma":[0.00001471009,0.0001254999,0.00004328681,0.00008966773,0.00003736731,0.00003685146,0.00004302467,0.0001075925,0.000003567219],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002748549,"about_ca_system_score_gemma":0.0001790878,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.3185352,"about_ca_topic_score_gemma":0.9398668,"domain_scores_codex":[0.9989208,0.0000298243,0.0002253518,0.0004039327,0.00002531793,0.0003947912],"domain_scores_gemma":[0.999607,0.000115244,0.00002521172,0.0001604553,0.00001279377,0.00007927863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000413368,0.001222442,0.542389,0.001293057,0.000997576,0.07054873,0.002292936,0.000003859743,0.2813309,0.00448209,0.03386463,0.06116135],"study_design_scores_gemma":[0.01771505,0.006247923,0.2092953,0.001366695,0.001531514,0.1637945,0.01058222,0.001767661,0.1801292,0.002416203,0.4031444,0.002009183],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993259,0.002163537,0.000007628066,0.003405533,0.0002296928,0.0005869608,0.0002265026,0.00003680288,0.00008435552],"genre_scores_gemma":[0.9986838,0.00007015408,0.0001790929,0.0004826504,0.0001488777,0.00007859158,0.0002695149,0.00002119125,0.00006618668],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6213316,"threshold_uncertainty_score":0.6860027,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05815882302211586,"score_gpt":0.2881427588380875,"score_spread":0.2299839358159716,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}