{"id":"W4400092930","doi":"10.1093/infdis/jiae245","title":"<i>Treponema pallidum</i> Periplasmic and Membrane Proteins Are Recognized by Circulating and Skin CD4+ T Cells","year":2024,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Treponema; Antigen; Biology; Immunology; T cell; Virology; Epitope; T lymphocyte; ELISPOT; Immune system; Syphilis; CD8","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001012282,0.0002255982,0.0001533821,0.0001475649,0.00009847683,0.0002539738,0.0001226872,0.0002839294,0.003422133],"category_scores_gemma":[0.0002110144,0.0001057025,0.0001261789,0.00005024913,0.0001204893,0.0001242667,0.000124825,0.0002608409,0.0004916181],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001711905,"about_ca_system_score_gemma":0.00007567673,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004210925,"about_ca_topic_score_gemma":0.0002372059,"domain_scores_codex":[0.9999259,0.000009793735,0.000003780661,0.00002248367,0.00001288237,0.0000251525],"domain_scores_gemma":[0.9999067,0.00001599248,0.00003449578,0.000006786096,0.00001785744,0.00001826555],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005726977,0.00007384604,0.02759251,0.0001417773,0.00001622625,0.0002866086,0.000127638,0.00005869395,0.9575191,0.00007054123,0.0002795116,0.01326092],"study_design_scores_gemma":[0.0001656834,0.004574867,0.5157681,0.0001438804,0.0001313199,0.0125505,0.0005800006,0.001781277,0.4547226,0.0004269297,0.009135818,0.00001903465],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970796,0.0006536485,0.0004966761,0.00004372445,0.000006802029,0.00001566317,0.00007235674,0.00003610821,0.001595517],"genre_scores_gemma":[0.9982583,0.0002236422,0.0004326281,0.00004280903,0.00001444783,0.00001723591,0.0001537913,0.000006610588,0.0008506466],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003422133,"threshold_uncertainty_score":0.0114482,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008368523914899171,"score_gpt":0.2422731960268621,"score_spread":0.2339046721119629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}